Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1002
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein lig...   109   5e-24
AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p pro...   109   5e-24
AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,...   109   5e-24
AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,...   109   5e-24
U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein lig...   107   1e-23
U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein lig...   107   1e-23
U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic dy...   107   1e-23
AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,...   107   1e-23
AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,...   107   1e-23
AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,...   107   1e-23
AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,...   107   1e-23
AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA...    39   0.008

>U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  109 bits (261), Expect = 5e-24
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPT
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPT 53



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361
           HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 55  HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p
           protein.
          Length = 89

 Score =  109 bits (261), Expect = 5e-24
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPT
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPT 53



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361
           HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 55  HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,
           isoform B protein.
          Length = 89

 Score =  109 bits (261), Expect = 5e-24
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPT
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPT 53



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361
           HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 55  HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,
           isoform A protein.
          Length = 89

 Score =  109 bits (261), Expect = 5e-24
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPT
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPT 53



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361
           HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 55  HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  107 bits (258), Expect = 1e-23
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPT
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPT 53



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361
           HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 55  HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  107 bits (258), Expect = 1e-23
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPT
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPT 53



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361
           HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 55  HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic
           dynein light chain 1 protein.
          Length = 89

 Score =  107 bits (258), Expect = 1e-23
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPT
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPT 53



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361
           HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 55  HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,
           isoform D protein.
          Length = 89

 Score =  107 bits (258), Expect = 1e-23
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPT
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPT 53



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361
           HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 55  HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,
           isoform C protein.
          Length = 89

 Score =  107 bits (258), Expect = 1e-23
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPT
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPT 53



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361
           HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 55  HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,
           isoform B protein.
          Length = 89

 Score =  107 bits (258), Expect = 1e-23
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPT
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPT 53



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361
           HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 55  HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,
           isoform A protein.
          Length = 89

 Score =  107 bits (258), Expect = 1e-23
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPT
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPT 53



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361
           HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 55  HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA
           protein.
          Length = 104

 Score = 38.7 bits (86), Expect = 0.008
 Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = +3

Query: 78  KQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKY 245
           K+ + K+     ++K+ DM+EEM+ +A++ +  A EK++   + AA  IK+  DKK+
Sbjct: 8   KEGEKKIVHVYPLVKHTDMNEEMRIEAIELSITACEKYSSNYEHAAKIIKENMDKKF 64



 Score = 37.9 bits (84), Expect = 0.013
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = +2

Query: 215 IHQERI*QEIQSYRHCIVGRNFGSYVTHETRHFIY-FYLGQVAILLFK 355
           I +E + ++   Y H +VG  FG  V++ET + +Y F+ G +AI+L+K
Sbjct: 55  IIKENMDKKFGIYWHVVVGEGFGFEVSYETENILYLFFAGNLAIVLWK 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,148,144
Number of Sequences: 53049
Number of extensions: 618121
Number of successful extensions: 1492
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)