Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0994
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0) 54 1e-07
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 48 7e-06
SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_33725| Best HMM Match : Kelch_1 (HMM E-Value=3.59994e-42) 46 3e-05
SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45) 45 5e-05
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 45 5e-05
SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_38405| Best HMM Match : BACK (HMM E-Value=0) 42 4e-04
SB_18403| Best HMM Match : BACK (HMM E-Value=0) 42 4e-04
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 42 5e-04
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 42 6e-04
SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 41 8e-04
SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0) 38 0.008
SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23) 38 0.008
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 38 0.010
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 38 0.010
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 37 0.014
SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0) 37 0.014
SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) 37 0.018
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 36 0.024
SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 36 0.024
SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42) 36 0.032
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13) 36 0.042
SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17) 35 0.073
SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18) 33 0.17
SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36) 33 0.22
SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30) 33 0.29
SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30) 32 0.51
SB_48929| Best HMM Match : BTB (HMM E-Value=1.4e-15) 31 0.68
SB_25029| Best HMM Match : Collagen (HMM E-Value=0.38) 30 1.6
SB_34102| Best HMM Match : Kelch_1 (HMM E-Value=0) 30 2.1
SB_30888| Best HMM Match : CARDB (HMM E-Value=0.85) 30 2.1
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 3.3
SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16) 29 3.6
SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_51776| Best HMM Match : S-antigen (HMM E-Value=0.24) 28 8.4
SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 645
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I+ H++VLS CS YF MF N ++ ++++K + +AL+ L+ F Y G+ + QE +
Sbjct: 43 ISAHRVVLSACSAYFDAMFTGNLLESKKQVIYIKGIDETALQLLVDFAYTGKAEITQENV 102
Query: 422 ASFISTAEQLQV 457
+ A LQ+
Sbjct: 103 QLLLPAANMLQL 114
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H++VL+ CSPYF+ MF +M ++ + ++DV SA+ L+ F Y + +++ +
Sbjct: 70 IHAHRVVLAACSPYFRAMFTREMAESRQAEITIRDVDESAMNLLITFAYTASITIEETNV 129
Query: 422 ASFISTAEQLQV 457
+ + A LQ+
Sbjct: 130 QTLLPAACLLQL 141
>SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
A H+ VL+ CS YF MF ++ ++ I+ +KD+ ++ L++F Y G V + E +
Sbjct: 24 AGHRAVLASCSAYFYAMFNGELAESKQKIITMKDILPDYMQVLVEFAYTGRVEITVENVQ 83
Query: 425 SFISTAEQLQ 454
+ ++TA LQ
Sbjct: 84 NLLATASLLQ 93
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFKMN---PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 418
I +HKLVL+ SPYF+ MF N TQ I L D+ AL+ ++++ Y G++ + ++
Sbjct: 44 IPSHKLVLAASSPYFRAMFTSNLLECTQRTIT-LYDIDVGALQQIVEYFYTGKITIDEDN 102
Query: 419 LASFISTAEQLQV 457
+ + + LQV
Sbjct: 103 VQFLLHASCLLQV 115
>SB_33725| Best HMM Match : Kelch_1 (HMM E-Value=3.59994e-42)
Length = 635
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
+ H+LVL+ SP+F +F +M Q + LK V S + ++L+++Y G+ ++ E
Sbjct: 46 SAHRLVLAAGSPFFHGLFTTEMKEKQENKIVLKQVKASVMENVLEYLYTGKTSLNPENAE 105
Query: 425 SFISTAEQLQVKGL 466
+ +A ++GL
Sbjct: 106 DLVVSASYFLIEGL 119
>SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45)
Length = 554
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I HKLVLS S YF+ MF M +Q + ++ + ++ L++F Y V + E +
Sbjct: 38 IDAHKLVLSASSEYFRAMFLTDMKESQQKFITIRAIDSQSMTTLVEFAYTSNVRINSENV 97
Query: 422 ASFISTAEQLQ 454
+ + A LQ
Sbjct: 98 ETLLYAASMLQ 108
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
HK+V+S SPYF+ +F + + V ++ + LL F+Y G +NV +E +
Sbjct: 48 HKIVVSASSPYFEVLFSGGLRESYLDTVTIQGIDSETFSALLDFIYTGVINVNEENVQQL 107
Query: 431 ISTAEQLQV 457
+ A+ LQ+
Sbjct: 108 LPAAKMLQL 116
>SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I HKLVL+ S YF MF M T V L D+ +A++ L+ + Y E+ ++ + +
Sbjct: 45 IRAHKLVLASFSDYFSAMFTGDMAETSQNTVHLTDMDPAAVQALISYSYTSEIEIRVDNV 104
Query: 422 ASFISTAEQLQVKGLTGNQNEESSTPSKPSRLRG 523
+ +S A LQ+ + +E PS G
Sbjct: 105 ENLLSVACILQIDEVKNACSEFMRHQLHPSNCLG 138
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
I HK VLS+ S F MF TQ V L DV SA LL+F+Y EV + E +
Sbjct: 1624 IPAHKFVLSIGSAVFDAMFNGGIATQSDEVELPDVEPSAFMALLRFLYTDEVQIGPETVM 1683
Query: 425 SFISTAEQLQVKGL 466
+ + TA++ + L
Sbjct: 1684 TTLYTAKKYAIPTL 1697
>SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 239 KXXIATHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 412
K I +H+L+L+ S YF MF M+ T + LK+V + +R L+++ Y + + +
Sbjct: 44 KMEIPSHRLILAANSSYFYSMFTSGMSETAQNRINLKEVDATVVRQLIEYCYTSTIEINE 103
Query: 413 EELASFISTAEQLQ 454
+ + +S LQ
Sbjct: 104 NNVQNLLSIGNLLQ 117
>SB_38405| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H+LVL+ CS YF MF ++ ++ + L+ + A+ L++F Y + V ++ +
Sbjct: 53 IYAHRLVLAACSQYFHAMFTSELLESRQKEISLQGLQPDAMELLVEFAYTARIQVSEDNV 112
Query: 422 ASFISTAEQLQVKGL 466
+ + A LQ++ +
Sbjct: 113 QALLPAASLLQLESV 127
>SB_18403| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H+LVL+ CS YF MF ++ ++ + L+ + A+ L++F Y + V ++ +
Sbjct: 53 IYAHRLVLAACSQYFHAMFTSELLESRQKEISLQGLQPDAMELLVEFAYTARIQVSEDNV 112
Query: 422 ASFISTAEQLQVKGL 466
+ + A LQ++ +
Sbjct: 113 QALLPAASLLQLESV 127
>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 481
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFKMNPTQ--HPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H+LVL+ S YFQ MF + V L+DV A+ L+ F Y G++++ E +
Sbjct: 58 IVAHRLVLASFSSYFQAMFTGGLVESFEDSVTLRDVDSGAVELLVDFAYTGKLDITTENV 117
Query: 422 ASFISTAEQLQVKGLTGNQNEESSTPSKPSRLRG 523
S + + Q+ + +E PS G
Sbjct: 118 QSIMYASSLFQLNAIQKACSEFLERQLHPSNCLG 151
>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 587
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
H++VL+ S YF +F +M P V L+++ S + +L ++Y GE+ V +
Sbjct: 44 HRIVLAASSKYFYGLFTSEMIEKNAPSVKLQELRASVMNHILTYLYTGEITVTELNAEDL 103
Query: 431 ISTAEQLQVKGLTG 472
I++A L + L G
Sbjct: 104 IASANYLLIPRLKG 117
>SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 625
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H++VL+ CS YF MF M + ++ ++ +S ++ L+ FMY ++ + + +
Sbjct: 45 IRCHRVVLASCSAYFHSMFTNSMLESSQEVITIQGLSEKSVIQLINFMYTRKITITIDNI 104
Query: 422 ASFISTAEQLQV 457
S ++ + Q+
Sbjct: 105 ESLLTASAVFQL 116
>SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
IA H+ VL+ SPYF+ MF N + + LK ++ AL+ LL ++Y + + + +
Sbjct: 94 IAVHRNVLAAVSPYFRAMFTGNLLESGKNRILLKGIAGVALQALLDYVYTSSIEIFDDNV 153
Query: 422 ASFISTAEQLQVKGLTGNQNEESSTPSKPSRLRG 523
++ A Q+ + +E PS G
Sbjct: 154 EEVLNAACAFQIPEIINVCSEFLKEQLHPSNCLG 187
>SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
A HK VL S +F +F M Q V LK + + DLL ++Y G++ V +
Sbjct: 33 AAHKNVLCASSIFFNGLFSSSMRERQENTVNLKQFPVNIMEDLLTYLYTGKLEVTEATAQ 92
Query: 425 SFISTAEQL 451
F++ A+ L
Sbjct: 93 DFLAAADFL 101
>SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23)
Length = 417
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 239 KXXIATHKLVLSVCSPYFQEMFKMNPTQHP-IVFLKDVSHSALRDLLQFMYQGEVNVKQE 415
K I H+ VLSV SP F+ MF + + L D AL ++L++ Y EV +
Sbjct: 40 KISIPAHRYVLSVSSPVFEAMFHGAMAESSREISLPDCYAEALSEMLRYAYYDEVKLTGS 99
Query: 416 ELASFISTAEQLQVKGL 466
+ + AE+ GL
Sbjct: 100 NAMAVMYLAEKYNFPGL 116
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFKMN-PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
HK +L+ S YF MF + T V +++++ +A+ LL F+YQG++ + +E +
Sbjct: 48 HKNILAASSDYFMAMFSGHMATVDRTVVVQEITSTAMEVLLAFIYQGKLLITEENV 103
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
H+ +LS S YF MF M + +V + V+ ++R +L F+Y GE+ + + +
Sbjct: 48 HRNILSASSDYFFAMFNGNMKESSQDVVTITGVTPDSMRSILNFIYTGEIVLDWDNVELI 107
Query: 431 ISTAEQLQVKGL 466
+ A + V+ +
Sbjct: 108 LQGANLMLVQSV 119
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFKMNPTQH-PIVFLKDVSHSALRDLLQFMYQGEV 400
HK VLSV SP F+ MF N + P V L D + ++LL+++Y +V
Sbjct: 46 HKFVLSVSSPVFEAMFFGNLAESGPTVRLPDCTVDGFQELLRYLYCDQV 94
>SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
H+ +L+ SPYF+ +F +M Q + L +V + D+L ++Y G V V++ +
Sbjct: 40 HRNILAASSPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYLYSGSVVVEESKAIPL 99
Query: 431 ISTAEQL 451
A+ +
Sbjct: 100 TVAADYM 106
>SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)
Length = 518
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H++VL+ CSPYF+ M T + L + ++ ++++ Y + + +E +
Sbjct: 50 IKAHRVVLAACSPYFRAMLTTGFAETFMSTIPLHECDPVGVQSIVEYFYSKRLTITKENI 109
Query: 422 ASFISTAEQLQVKGL 466
+S A ++ +
Sbjct: 110 EGLLSAASLFEIPSI 124
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 239 KXXIATHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 415
K I HKL+L++ SP F MF + Q + + D + +LL++ Y E + +E
Sbjct: 2773 KYFIPGHKLILAISSPVFYAMFYGSMAEQKAEITVADSDADSFMELLRYAYFDEATINEE 2832
Query: 416 ELASFISTAEQLQVKGLTGNQ 478
+ + A++ + L N+
Sbjct: 2833 NVLGVLYLAKKYILPFLADNK 2853
>SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
HK VL SP+F+ +F M + L+ +S +++ FMY G + V++E
Sbjct: 49 HKNVLCAASPFFRGLFTNDMQEKNQEHIELQVISGDVGEEVISFMYTGAIKVEKENAQDI 108
Query: 431 ISTAEQLQVKGL 466
+ + L + L
Sbjct: 109 VMAGDFLLIPSL 120
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 412
H+ +L+ SPYF+ +F +M Q + L +V + D+L ++Y G V V++
Sbjct: 1409 HRNILAASSPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYLYSGSVVVEE 1462
>SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42)
Length = 603
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
A H+ VL+ S +F MF M + + L ++ AL +L F Y E+N+ ++ +
Sbjct: 64 AAHRCVLAANSQFFYTMFTSGMRDSNDSRIKLCSLTSGALSSILDFFYTREINISRDNVV 123
Query: 425 SFISTAEQL 451
+ A L
Sbjct: 124 DILEAASFL 132
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 35.9 bits (79), Expect = 0.032
Identities = 24/118 (20%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Frame = +2
Query: 119 LSWRRTNNFHYAGTISTQICQ-RAFMACCRVEIS*T*RWLPKXXIATHKLVLSVCSPYFQ 295
+ ++ ++ Y ++++Q+ Q + + C + + T + HK+VL+ S YF+
Sbjct: 1 MDYQNIDDVEYRKSVTSQLMQYQESESMCDITLKTT----SEDIFPAHKIVLAAKSDYFK 56
Query: 296 EMFKMNPTQHPIVFLK-DVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 466
+F + + D+S L+ +L+++Y G+V++ S A+ L + L
Sbjct: 57 ALFTTEMAEKNCQEISLDISTRTLKAILKYVYCGDVSLNVSNARSVFVAADYLMMDHL 114
>SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13)
Length = 133
Score = 35.5 bits (78), Expect = 0.042
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 239 KXXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
K I HK VL+ SP F+ MF K+ T I L D + + ++L+++Y+ EV
Sbjct: 7 KVSIPAHKYVLATSSPVFEAMFFGKLAETSRNIT-LPDCFYEGVLEMLRYLYRDEV 61
>SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 35.1 bits (77), Expect = 0.055
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 239 KXXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
K I HK VL+ SP F+ MF K+ T I L D S + ++L+F+Y E+
Sbjct: 38 KVSIPAHKYVLATSSPVFEAMFFGKLAETGFTIA-LPDCSAEGMLEMLRFIYTEEI 92
>SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17)
Length = 259
Score = 34.7 bits (76), Expect = 0.073
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIS 436
HK LS+ SP F++MF+ Q + L ++++L +Y V +E ++
Sbjct: 31 HKSTLSMWSPVFEKMFRERNDQE--ICLPGKKSKEIKEMLLVIYPTSKKVTEENCYYLLT 88
Query: 437 TAEQLQVKGLT 469
A++ Q++ LT
Sbjct: 89 LAQEYQMEQLT 99
>SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 239 KXXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 406
K H++VL+ CS YF MF M +Q ++ L+ ++ + LL F+Y V +
Sbjct: 46 KKEFPAHRIVLASCSDYFYAMFTNDMLESQKGVIELQGLASDTMEVLLDFVYTETVKL 103
>SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18)
Length = 123
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/72 (20%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 418
++ H++VL+ SPYF+E+ + V + A+ +L+F Y G + + +
Sbjct: 52 LSAHRVVLAALSPYFRELLLPTNNEKAEKEYVMPDSLKPGAVVAMLEFFYSGTLQINLKS 111
Query: 419 LASFISTAEQLQ 454
+ ++ A ++
Sbjct: 112 IEDLLAAASTMK 123
>SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36)
Length = 398
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
HK +L+ SP F MF +M ++ V + D+ +++L+F+Y G Q
Sbjct: 237 HKAILAARSPVFSAMFEHEMEESRKGRVEILDIDPDVFQEMLKFVYTGNTPQIQGMADDL 296
Query: 431 ISTAEQLQVKGL 466
++ A++ ++ L
Sbjct: 297 LAAADKYDLERL 308
>SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30)
Length = 176
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFK---MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 427
HKLVL+ S YF+ MF + +++ +V L D+ + ++ + Y ++ + + +
Sbjct: 47 HKLVLAANSTYFRAMFGEGFVESSKNDVV-LHDLDPKGVNAVISYFYNSKIEINADNFGA 105
Query: 428 FISTAEQLQVK 460
+ A VK
Sbjct: 106 VFAVANMWDVK 116
>SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30)
Length = 619
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
HKLVL+ S YF+ MF + + V L D+ + ++ + Y ++ + +
Sbjct: 89 HKLVLAANSTYFRAMFGLREGFVESSKNDVVLHDLDPKGVNAVISYFYNSKIEINADNFE 148
Query: 425 SFISTAEQLQVK 460
+ + A VK
Sbjct: 149 AVFAVANMWDVK 160
>SB_48929| Best HMM Match : BTB (HMM E-Value=1.4e-15)
Length = 239
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN--VKQEELASF 430
HK +L + SP F+ MF+ PI L + + DL+ +Y N + + +
Sbjct: 32 HKFILKMASPVFKAMFEHVKDSKPIQ-LPGKKFNQVLDLMNHIYPTSNNSSITMDNVEHL 90
Query: 431 ISTAEQLQVKGLTGN 475
+ A + Q+K +T +
Sbjct: 91 SALAAEYQIKAVTNS 105
>SB_25029| Best HMM Match : Collagen (HMM E-Value=0.38)
Length = 388
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 227 RWLPKXXIATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKD 346
RW + I+T ++ +CSP + +M +M P + P FL +
Sbjct: 286 RWAQQQ-ISTSSKIIVLCSPKYLKMCQMRPKEDPKAFLTE 324
>SB_34102| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 628
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/53 (20%), Positives = 30/53 (56%)
Frame = +2
Query: 308 MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 466
M+ ++ V L+++ A+++++ F Y G++ + + + + A LQV+ +
Sbjct: 66 MSESRQDTVTLQELDEKAMQNMIDFFYSGKIEISELNVQEVLPIACLLQVQSV 118
>SB_30888| Best HMM Match : CARDB (HMM E-Value=0.85)
Length = 299
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 392 GEVNVKQEELASFISTAEQLQVKGLTGN-QNEESSTPSKPSRLRGQAPGR 538
G+VNV + S+ +Q K Q + STP+ +RLRG +PGR
Sbjct: 79 GQVNVDLNQELSWPQYPGAVQYKIFIWKYQTPQPSTPTATTRLRGYSPGR 128
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 24.6 bits (51), Expect(2) = 3.3
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 6/40 (15%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF----KMN--PTQHPIVFLKDVSHS 358
H+ +LS SP F+E+F K+N P ++ +F D+S S
Sbjct: 266 HQTILSAASPIFRELFLGSKKVNAVPRKYQAIF-SDISWS 304
Score = 23.0 bits (47), Expect(2) = 3.3
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 344 DVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVK 460
D+S + +LQF+Y G + E + F+ ++ K
Sbjct: 329 DISCESFEKILQFLYTGLPGFSEIEDSDFVLDVKKTAAK 367
>SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1221
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 511 PTSRPGPRSSQQRQSVMTKLETDLDSKPSSTPVAVKRPNRAS 636
PTS PGP S+ R++ T L+ SKP P+ K P R S
Sbjct: 367 PTSTPGPSSA--RRTSYTGLQNHTPSKP---PMPAKSPGRHS 403
>SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16)
Length = 605
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
I HK +L V SP F MF T V L D L + L+++Y V E
Sbjct: 47 IPAHKYILGVSSPVFFAMFYGQMSTSISKVELPDCDSVGLIEFLRYLYCNRVKFTMESAI 106
Query: 425 SFISTAEQLQVKGL 466
+ +++ V L
Sbjct: 107 QALYLSKKYLVPSL 120
>SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSH---SALRDLLQFMYQGEVNVKQEE 418
I HK+VL+ SPYF+ +F + + + ++ S+ A+ +++ ++Y G+++
Sbjct: 59 IPCHKVVLAARSPYFRHLFINSESGQYVKNVELPSYFSILAVDEVINYLYSGKLHFTPTN 118
Query: 419 LASFISTAEQLQVKGL 466
A +++ L
Sbjct: 119 TVDIFKCALHIELDAL 134
>SB_51776| Best HMM Match : S-antigen (HMM E-Value=0.24)
Length = 1669
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +2
Query: 377 QFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNEESSTPSKPSRLRGQAPGRHNKDN 553
+F+ E ++ + +T Q+ + G + +S+TP SR R+ DN
Sbjct: 645 EFVQGHETDIDDVATSEMSNTTSQIPIDNKEGKKRNKSTTPLNQSRKSKTNQSRYGSDN 703
>SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 124 MASDEQFSLCWNNFHANMSAGFHGL 198
M S E WN F N++AG+H L
Sbjct: 203 MMSYEGMQFDWNTFSVNLTAGYHQL 227
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,586,705
Number of Sequences: 59808
Number of extensions: 364770
Number of successful extensions: 1078
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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