Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0992
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050604-1|AAH50604.1| 560|Homo sapiens radial spoke head 3 hom... 46 1e-04
AL035530-5|CAI19236.1| 322|Homo sapiens radial spokehead-like 2... 46 1e-04
AL035530-4|CAI19235.1| 418|Homo sapiens radial spokehead-like 2... 46 1e-04
AK057931-1|BAB71615.1| 560|Homo sapiens protein ( Homo sapiens ... 46 1e-04
AK057655-1|BAB71544.1| 322|Homo sapiens protein ( Homo sapiens ... 46 1e-04
AF353618-1|AAK26432.1| 418|Homo sapiens radial spoke protein 3 ... 46 1e-04
L49054-1|AAA99997.1| 268|Homo sapiens NPM-MLF1 protein. 33 0.98
BC007045-1|AAH07045.1| 268|Homo sapiens myeloid leukemia factor... 33 0.98
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 31 3.0
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 6.9
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 30 6.9
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 6.9
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 30 6.9
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 6.9
BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine phosph... 30 9.1
BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine phosph... 30 9.1
BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein. 30 9.1
BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein. 30 9.1
AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein pr... 30 9.1
AK096889-1|BAC04885.1| 299|Homo sapiens protein ( Homo sapiens ... 30 9.1
AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosph... 30 9.1
AB040904-1|BAA95995.2| 1421|Homo sapiens KIAA1471 protein protein. 30 9.1
AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosph... 30 9.1
>BC050604-1|AAH50604.1| 560|Homo sapiens radial spoke head 3
homolog (Chlamydomonas) protein.
Length = 560
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 426 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 481
Query: 187 EPEDSITHPSAVS 225
EPED P A++
Sbjct: 482 EPEDEPGGPGAMT 494
>AL035530-5|CAI19236.1| 322|Homo sapiens radial spokehead-like 2
protein.
Length = 322
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 188 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 243
Query: 187 EPEDSITHPSAVS 225
EPED P A++
Sbjct: 244 EPEDEPGGPGAMT 256
>AL035530-4|CAI19235.1| 418|Homo sapiens radial spokehead-like 2
protein.
Length = 418
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 284 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 339
Query: 187 EPEDSITHPSAVS 225
EPED P A++
Sbjct: 340 EPEDEPGGPGAMT 352
>AK057931-1|BAB71615.1| 560|Homo sapiens protein ( Homo sapiens
cDNA FLJ25202 fis, clone REC05350. ).
Length = 560
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 426 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 481
Query: 187 EPEDSITHPSAVS 225
EPED P A++
Sbjct: 482 EPEDEPGGPGAMT 494
>AK057655-1|BAB71544.1| 322|Homo sapiens protein ( Homo sapiens
cDNA FLJ33093 fis, clone TRACH2000675, weakly similar to
RADIAL SPOKE PROTEIN 3. ).
Length = 322
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 188 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 243
Query: 187 EPEDSITHPSAVS 225
EPED P A++
Sbjct: 244 EPEDEPGGPGAMT 256
>AF353618-1|AAK26432.1| 418|Homo sapiens radial spoke protein 3
protein.
Length = 418
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 284 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 339
Query: 187 EPEDSITHPSAVS 225
EPED P A++
Sbjct: 340 EPEDEPGGPGAMT 352
>L49054-1|AAA99997.1| 268|Homo sapiens NPM-MLF1 protein.
Length = 268
Score = 33.1 bits (72), Expect = 0.98
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 70 ESIITSRDVITEIVRDVVEARGELYRNVAE---REENEQGRNEPEDSITHPSAVS 225
ESI+ R+ + +++R E G ++++ R N +G N+ EDS+TH S
Sbjct: 17 ESILAHRENMRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTHTDVSS 71
>BC007045-1|AAH07045.1| 268|Homo sapiens myeloid leukemia factor 1
protein.
Length = 268
Score = 33.1 bits (72), Expect = 0.98
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 70 ESIITSRDVITEIVRDVVEARGELYRNVAE---REENEQGRNEPEDSITHPSAVS 225
ESI+ R+ + +++R E G ++++ R N +G N+ EDS+TH S
Sbjct: 17 ESILAHRENMRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTHTDVSS 71
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 122 WKPEENCTETLLRERRMNRGGTSPRTASLTPPPCLRRGRKSISKMTR--RRETNNY 283
W+ ++ C RE RG ++ LTPPP RG+K K TR RR +++Y
Sbjct: 174 WERDKTC-----RELGATRGHSASHDKDLTPPPSS-RGKKKKKKSTRKKRRRSSSY 223
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 30.3 bits (65), Expect = 6.9
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +2
Query: 164 RRMNRGGTSP----RTASLTPPPCLRRGRKSISKMTRRR 268
RR +R T P R+ S TPP RR R S +TRRR
Sbjct: 1943 RRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRR 1981
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 30.3 bits (65), Expect = 6.9
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +2
Query: 164 RRMNRGGTSP----RTASLTPPPCLRRGRKSISKMTRRR 268
RR +R T P R+ S TPP RR R S +TRRR
Sbjct: 975 RRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRR 1013
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 30.3 bits (65), Expect = 6.9
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +2
Query: 164 RRMNRGGTSP----RTASLTPPPCLRRGRKSISKMTRRR 268
RR +R T P R+ S TPP RR R S +TRRR
Sbjct: 1943 RRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRR 1981
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 30.3 bits (65), Expect = 6.9
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +2
Query: 164 RRMNRGGTSP----RTASLTPPPCLRRGRKSISKMTRRR 268
RR +R T P R+ S TPP RR R S +TRRR
Sbjct: 466 RRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRR 504
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.3 bits (65), Expect = 6.9
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +2
Query: 164 RRMNRGGTSP----RTASLTPPPCLRRGRKSISKMTRRR 268
RR +R T P R+ S TPP RR R S +TRRR
Sbjct: 1991 RRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRR 2029
>BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 577
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLTPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 36 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 69
>BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 1636
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLTPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 1095 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 1128
>BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.
Length = 1320
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLTPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 779 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 812
>BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein.
Length = 619
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLTPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 78 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 111
>AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein
protein.
Length = 990
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLTPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 449 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 482
>AK096889-1|BAC04885.1| 299|Homo sapiens protein ( Homo sapiens
cDNA FLJ39570 fis, clone SKMUS2001850, highly similar to
Homo sapiens t(3;5)(q25.1;p34) fusion gene NPM-MLF1
mRNA. ).
Length = 299
Score = 29.9 bits (64), Expect = 9.1
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 70 ESIITSRDVITEIVRDVVEARGELYRNVAE---REENEQGRNEPEDSITHPS 216
ESI+ R+ + +++R E G ++++ R N +G N+ EDS+T S
Sbjct: 33 ESILAHRENMRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTATS 84
>AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosphatase
TD14 protein.
Length = 1636
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLTPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 1095 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 1128
>AB040904-1|BAA95995.2| 1421|Homo sapiens KIAA1471 protein protein.
Length = 1421
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLTPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 1133 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 1166
>AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosphatase
HD-PTP protein.
Length = 1636
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLTPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 1095 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 1128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,437,327
Number of Sequences: 237096
Number of extensions: 1673331
Number of successful extensions: 4168
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4165
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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