Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0989
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 122 2e-28
SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11) 50 2e-06
SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_45731| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_12257| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 28 6.3
SB_51591| Best HMM Match : HECT (HMM E-Value=0) 28 8.4
>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
Length = 427
Score = 122 bits (295), Expect = 2e-28
Identities = 65/148 (43%), Positives = 88/148 (59%)
Frame = +3
Query: 255 NXTHLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHEL 434
N H + +LE G V S+VTQNVD LH KAGS+ VIELHG S+ V CL C R L
Sbjct: 232 NEAHYALAKLETLGSVHSLVTQNVDALHTKAGSKNVIELHGCSHRVICLGCNQITARTAL 291
Query: 435 QEILTENNPDMESSFSMIRPDGDVDCRGNK*KNSELHSAQSVKGPLKPDIVFFGDNVPKY 614
Q+ + E NPD + PDGD K+ ++ ++ G LKP++VFFGD+VPK
Sbjct: 292 QKRMIEFNPDWHAVGQGQAPDGDTFLTSEAVKDFKVPPCKACGGILKPEVVFFGDSVPKQ 351
Query: 615 RVEQVRKXVTSSDAVFVMGSSLTVYSSY 698
V + SDA++++GS++ VYSSY
Sbjct: 352 IVNIAYDRLAESDALWIIGSTVEVYSSY 379
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +1
Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
GI DYRSE GLYA +N +P++YQ F+K +RQRYWARNY+GWP F QP
Sbjct: 180 GIRDYRSEGKGLYAITNDRPMEYQVFLKSAVMRQRYWARNYVGWPEFGSRQP 231
>SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11)
Length = 813
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +3
Query: 249 ATNXTHLCIRELEKKGKVTSIVTQNVDRLHHKAG--SEKVIELHGTSYLVQCLKCPYEID 422
A TH+ I +L+++G V +++QNVD LH K+G K+ ELHG ++ +C KC E
Sbjct: 230 APTLTHMAIVKLQEEGLVHYVISQNVDGLHLKSGYPRSKLSELHGNMFVEKCDKCNKEYV 289
Query: 423 R 425
R
Sbjct: 290 R 290
>SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 543 HSAQSVKGPLKPDIVFFGDNVPKYRVEQVRKXVTSSDAVFVMGSSLTV 686
+ + ++G +KPD+VFFG+++PK R D + VMG+SL V
Sbjct: 236 YDGEQIRGVIKPDVVFFGEDLPK-RFYSFEIDFRKCDLLLVMGTSLEV 282
>SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 35.5 bits (78), Expect = 0.042
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 570 LKPDIVFFGDNVPKYRVEQVRKXVTSSDAVFVMGSSLTV 686
+KPDIVFFG+++P + +D + V+GSSL V
Sbjct: 197 MKPDIVFFGESLPSNFYTHLGDDSNKADLLIVIGSSLKV 235
>SB_45731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 339 HKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQEILTENNPD---MESSFSMIRPDGDVD 509
H GS +IE++G CL P H+ +++ D ++SS M+ P D D
Sbjct: 193 HMRGSNNIIEINGLGRPGDCLPVPTNTINHDSDYEDDDDDDDDLSVQSSSDMLPPHLDAD 252
Query: 510 CR 515
R
Sbjct: 253 FR 254
>SB_12257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 279 ELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQEILTENN 458
+LEK G + + V N+ K ELH + + Q L+CP ++ + + I +N
Sbjct: 6 QLEKSGLLITDVVTNITTTT-LIPDRKGWELHRLTAITQLLRCPIKLAKIDKPPIQRQNT 64
Query: 459 PDMESSFSMIR 491
SF + R
Sbjct: 65 LKKYLSFQLNR 75
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 150 SQTYTVSRICEVSESKAKVLGKKLYRLAEIQLCATNXTHLCIRELEKKGKVTSIVTQNVD 329
SQT TVSR E+ K VLGK + + L T + ++++E + +
Sbjct: 164 SQTSTVSRGEEIEWQKGNVLGKGAFGTVFLGLVNTGEL-IAVKQVELHPNNVDAAERQYE 222
Query: 330 RLHHKAGSEKVIELHG-TSYLVQCL 401
+L + G K ++ Y+ C+
Sbjct: 223 KLQEEVGLLKSLKHKNIVQYIGTCM 247
>SB_51591| Best HMM Match : HECT (HMM E-Value=0)
Length = 694
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +3
Query: 300 VTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQEILTENNPDMESSF 479
VTS+V L ++ E V E S L+ + E+D+ EL LT N D E+
Sbjct: 232 VTSLVVAGTSSLGNRQAVEHVTENCSDSELMAAVMMEQEVDQ-ELVSDLTPANRDNETID 290
Query: 480 SMIRPDGD 503
S DGD
Sbjct: 291 SQ-ENDGD 297
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,526,694
Number of Sequences: 59808
Number of extensions: 515813
Number of successful extensions: 1278
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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