SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0989
         (698 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g09230.6 68418.m01054 transcriptional regulator Sir2 family p...   116   2e-26
At5g09230.5 68418.m01052 transcriptional regulator Sir2 family p...   116   2e-26
At5g09230.4 68418.m01053 transcriptional regulator Sir2 family p...   116   2e-26
At5g09230.3 68418.m01049 transcriptional regulator Sir2 family p...   116   2e-26
At5g09230.2 68418.m01051 transcriptional regulator Sir2 family p...   116   2e-26
At5g09230.1 68418.m01050 transcriptional regulator Sir2 family p...   116   2e-26
At5g55760.1 68418.m06950 transcriptional regulator Sir2 family p...    50   1e-06
At5g34900.1 68418.m04114 Ulp1 protease family protein contains P...    30   1.7  
At3g47260.1 68416.m05133 Ulp1 protease family protein contains P...    30   1.7  
At3g44500.1 68416.m04783 Ulp1 protease family protein similar to...    30   1.7  
At2g14130.1 68415.m01574 Ulp1 protease family protein contains P...    30   1.7  
At2g45920.1 68415.m05710 U-box domain-containing protein contain...    28   5.2  
At1g59500.1 68414.m06680 auxin-responsive GH3 family protein sim...    28   5.2  
At4g04010.1 68417.m00571 Ulp1 protease family protein contains P...    28   6.8  
At1g48990.1 68414.m05492 glycine-rich protein / oleosin contains...    28   6.8  
At5g05820.1 68418.m00640 phosphate translocator-related low simi...    27   9.0  
At1g64410.1 68414.m07301 hypothetical protein                          27   9.0  
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ...    27   9.0  
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ...    27   9.0  

>At5g09230.6 68418.m01054 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family;
          Length = 271

 Score =  116 bits (279), Expect = 2e-26
 Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
 Frame = +3

Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
           H  +  LEK G++  ++TQNVDRLHH+AGS+  +ELHGT Y V CL+C +   R   Q  
Sbjct: 59  HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 117

Query: 438 ------------EILTENNPDMESSFSMI-RPDGDVDCRGNK*KNS-ELHSAQSVKGPLK 575
                       E +   +P  E SF M  RPDGD++      +    +   +  KG LK
Sbjct: 118 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIEIDEKFWEEGFHIPVCEKCKGVLK 177

Query: 576 PDIVFFGDNVPKYRVEQVRKXVTSSDAVFVMGSSLTVYSSY 698
           PD++FFGDN+PK R  Q  +    SDA  V+GSSL   S++
Sbjct: 178 PDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAF 218



 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +1

Query: 91  WSLGIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
           W+ G+   +   +  + ++N+     +EF +  + R+RYWAR+Y GW RF+  QP
Sbjct: 2   WNSGLQKSQWS-IQFWFQTNYPSGDLKEFTRSSRARRRYWARSYAGWRRFTAAQP 55


>At5g09230.5 68418.m01052 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family;
          Length = 354

 Score =  116 bits (279), Expect = 2e-26
 Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
 Frame = +3

Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
           H  +  LEK G++  ++TQNVDRLHH+AGS+  +ELHGT Y V CL+C +   R   Q  
Sbjct: 142 HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 200

Query: 438 ------------EILTENNPDMESSFSMI-RPDGDVDCRGNK*KNS-ELHSAQSVKGPLK 575
                       E +   +P  E SF M  RPDGD++      +    +   +  KG LK
Sbjct: 201 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIEIDEKFWEEGFHIPVCEKCKGVLK 260

Query: 576 PDIVFFGDNVPKYRVEQVRKXVTSSDAVFVMGSSLTVYSSY 698
           PD++FFGDN+PK R  Q  +    SDA  V+GSSL   S++
Sbjct: 261 PDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAF 301



 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 29/52 (55%), Positives = 37/52 (71%)
 Frame = +1

Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
           GIPDYRS + G Y+ S  KPI +QEF +  + R+RYWAR+Y GW RF+  QP
Sbjct: 89  GIPDYRSPN-GAYS-SGFKPITHQEFTRSSRARRRYWARSYAGWRRFTAAQP 138


>At5g09230.4 68418.m01053 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family;
          Length = 271

 Score =  116 bits (279), Expect = 2e-26
 Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
 Frame = +3

Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
           H  +  LEK G++  ++TQNVDRLHH+AGS+  +ELHGT Y V CL+C +   R   Q  
Sbjct: 59  HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 117

Query: 438 ------------EILTENNPDMESSFSMI-RPDGDVDCRGNK*KNS-ELHSAQSVKGPLK 575
                       E +   +P  E SF M  RPDGD++      +    +   +  KG LK
Sbjct: 118 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIEIDEKFWEEGFHIPVCEKCKGVLK 177

Query: 576 PDIVFFGDNVPKYRVEQVRKXVTSSDAVFVMGSSLTVYSSY 698
           PD++FFGDN+PK R  Q  +    SDA  V+GSSL   S++
Sbjct: 178 PDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAF 218



 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +1

Query: 91  WSLGIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
           W+ G+   +   +  + ++N+     +EF +  + R+RYWAR+Y GW RF+  QP
Sbjct: 2   WNSGLQKSQWS-IQFWFQTNYPSGDLKEFTRSSRARRRYWARSYAGWRRFTAAQP 55


>At5g09230.3 68418.m01049 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family;
          Length = 324

 Score =  116 bits (279), Expect = 2e-26
 Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
 Frame = +3

Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
           H  +  LEK G++  ++TQNVDRLHH+AGS+  +ELHGT Y V CL+C +   R   Q  
Sbjct: 161 HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 219

Query: 438 ------------EILTENNPDMESSFSMI-RPDGDVDCRGNK*KNS-ELHSAQSVKGPLK 575
                       E +   +P  E SF M  RPDGD++      +    +   +  KG LK
Sbjct: 220 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIEIDEKFWEEGFHIPVCEKCKGVLK 279

Query: 576 PDIVFFGDNVPKYRVEQVRKXVTSSDAVFVMGSSLTVYSSY 698
           PD++FFGDN+PK R  Q  +    SDA  V+GSSL   S++
Sbjct: 280 PDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAF 320



 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 29/52 (55%), Positives = 37/52 (71%)
 Frame = +1

Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
           GIPDYRS + G Y+ S  KPI +QEF +  + R+RYWAR+Y GW RF+  QP
Sbjct: 108 GIPDYRSPN-GAYS-SGFKPITHQEFTRSSRARRRYWARSYAGWRRFTAAQP 157


>At5g09230.2 68418.m01051 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family;
          Length = 373

 Score =  116 bits (279), Expect = 2e-26
 Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
 Frame = +3

Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
           H  +  LEK G++  ++TQNVDRLHH+AGS+  +ELHGT Y V CL+C +   R   Q  
Sbjct: 161 HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 219

Query: 438 ------------EILTENNPDMESSFSMI-RPDGDVDCRGNK*KNS-ELHSAQSVKGPLK 575
                       E +   +P  E SF M  RPDGD++      +    +   +  KG LK
Sbjct: 220 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIEIDEKFWEEGFHIPVCEKCKGVLK 279

Query: 576 PDIVFFGDNVPKYRVEQVRKXVTSSDAVFVMGSSLTVYSSY 698
           PD++FFGDN+PK R  Q  +    SDA  V+GSSL   S++
Sbjct: 280 PDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAF 320



 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 29/52 (55%), Positives = 37/52 (71%)
 Frame = +1

Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
           GIPDYRS + G Y+ S  KPI +QEF +  + R+RYWAR+Y GW RF+  QP
Sbjct: 108 GIPDYRSPN-GAYS-SGFKPITHQEFTRSSRARRRYWARSYAGWRRFTAAQP 157


>At5g09230.1 68418.m01050 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family;
          Length = 373

 Score =  116 bits (279), Expect = 2e-26
 Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
 Frame = +3

Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
           H  +  LEK G++  ++TQNVDRLHH+AGS+  +ELHGT Y V CL+C +   R   Q  
Sbjct: 161 HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 219

Query: 438 ------------EILTENNPDMESSFSMI-RPDGDVDCRGNK*KNS-ELHSAQSVKGPLK 575
                       E +   +P  E SF M  RPDGD++      +    +   +  KG LK
Sbjct: 220 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIEIDEKFWEEGFHIPVCEKCKGVLK 279

Query: 576 PDIVFFGDNVPKYRVEQVRKXVTSSDAVFVMGSSLTVYSSY 698
           PD++FFGDN+PK R  Q  +    SDA  V+GSSL   S++
Sbjct: 280 PDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAF 320



 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 29/52 (55%), Positives = 37/52 (71%)
 Frame = +1

Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
           GIPDYRS + G Y+ S  KPI +QEF +  + R+RYWAR+Y GW RF+  QP
Sbjct: 108 GIPDYRSPN-GAYS-SGFKPITHQEFTRSSRARRRYWARSYAGWRRFTAAQP 157


>At5g55760.1 68418.m06950 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family
          Length = 473

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
 Frame = +3

Query: 261 THLCIRELEKKGKVTSIVTQNVDRLHHKAG--SEKVIELHGTSYLVQCLKCPYEIDRHEL 434
           TH+ + ELE+ G +  +++QNVD LH ++G   EK+ ELHG S++  C  C  E  R   
Sbjct: 95  THMALVELERAGILKFVISQNVDGLHLRSGIPREKLSELHGDSFMEMCPSCGAEYLR--- 151

Query: 435 QEILTENNPDMESSFSMIRPDGDVDCRGNK*KNSELHSAQSVKGPLKPDIVFFGDNVPKY 614
                               D +V+  G K + S   S +     LK  ++ + D +P  
Sbjct: 152 --------------------DFEVETIGLK-ETSRKCSVEKCGAKLKDTVLDWEDALPPK 190

Query: 615 RVEQVRKXVTSSDAVFVMGSSLTV 686
            ++   K    +D V  +G+SL +
Sbjct: 191 EIDPAEKHCKKADLVLCLGTSLQI 214


>At5g34900.1 68418.m04114 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain; similar to At1g32840, At4g04010,
           At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
           At2g15190, At3g47260, At3g29210, At2g02210, At3g32900
          Length = 767

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 19  IKFSLNVFYTTHGVLCEVVH 78
           I+FSL  FY T G+ CE VH
Sbjct: 103 IRFSLREFYLTTGIQCEPVH 122


>At3g47260.1 68416.m05133 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain; similar to At1g32840, At4g04010,
           At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
           At2g15190, At5g34900, At3g29210, At2g02210, At3g32900
          Length = 820

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 19  IKFSLNVFYTTHGVLCEVVH 78
           I+FSL  FY T G+ CE VH
Sbjct: 103 IRFSLREFYLTTGIQCEPVH 122


>At3g44500.1 68416.m04783 Ulp1 protease family protein similar to
           At1g32840, At4g04010, At2g06430, At2g15140, At2g04980,
           At2g14130, At2g15190, At3g47260, At5g34900, At3g29210,
           At2g02210, At3g32900
          Length = 805

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 19  IKFSLNVFYTTHGVLCEVVH 78
           I+FSL  FY T G+ CE VH
Sbjct: 103 IRFSLREFYLTTGIQCEPVH 122


>At2g14130.1 68415.m01574 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain; similar to At1g32840, At4g04010,
           At2g06430, At2g15140, At2g04980, At3g44500, At2g15190,
           At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
          Length = 808

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 19  IKFSLNVFYTTHGVLCEVVH 78
           I+FSL  FY T G+ CE VH
Sbjct: 103 IRFSLREFYLTTGIQCEPVH 122


>At2g45920.1 68415.m05710 U-box domain-containing protein contains
           Pfam profile PF04564: U-box domain
          Length = 400

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +3

Query: 189 ESKAKVLGKKLYRLAEIQLCATNXTHLCIRELEKKGKVTSIVTQNVDRLHHKAGSE 356
           E   K+L K L +  ++Q+CA    H+ +  +E KG +  I  +NV +L   A S+
Sbjct: 57  EKTQKILDKYLQKCRQMQVCA-EMIHIKMESVE-KGIIQLISERNVKKLVMGAASD 110


>At1g59500.1 68414.m06680 auxin-responsive GH3 family protein
           similar to auxin-responsive GH3 product [Glycine max]
           GI:18591; contains Pfam profile PF03321: GH3
           auxin-responsive promoter
          Length = 597

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 366 QSLFQNQLCGVIYPHSVSL*MSLFPSSLV 280
           QS++   LCG++  H V+   ++FPS L+
Sbjct: 206 QSMYTQMLCGLLMRHEVNRLGAVFPSGLL 234


>At4g04010.1 68417.m00571 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain; similar to At1g32840, At2g06430,
           At2g15140, At2g04980, At2g14130, At3g44500, At2g15190,
           At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
          Length = 836

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 19  IKFSLNVFYTTHGVLCEVVH 78
           I FSL  FY T G+ CE VH
Sbjct: 103 ICFSLREFYLTTGIQCEPVH 122


>At1g48990.1 68414.m05492 glycine-rich protein / oleosin contains
           Pfam profile: PF01277 oleosin
          Length = 169

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 231 PTYIISCPVPLPYFRILHKFLILYRFVITTG 139
           P  IIS P+ +P F I+  FL L   ++ TG
Sbjct: 85  PLIIISSPIWIPLFLIVTGFLSLAGLILATG 115


>At5g05820.1 68418.m00640 phosphate translocator-related low
           similarity to phosphoenolpyruvate/phosphate translocator
           precursor [Mesembryanthemum crystallinum] GI:9295275,
           glucose-6-phosphate/phosphate-translocator precursor
           [Zea mays] GI:2997589; contains Pfam profile PF00892:
           Integral membrane protein
          Length = 309

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 623 FHAIFGYIVTKKHYIWFQRPLHTLGRVELGIFLLVPSTINIAIRSYHGETTFHIW-IILC 447
           F A+F Y++T+K   W            L  F LVP    + I S  GE +FH++  ++C
Sbjct: 116 FTAVFAYLMTRKKEAW------------LTYFTLVPVVTGVVIAS-GGEPSFHLFGFLMC 162


>At1g64410.1 68414.m07301 hypothetical protein
          Length = 1231

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +1

Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKY-PKVRQRYWARNYIGW 231
           G P YR  D G+Y   N      +  + Y  K+  RY A   + W
Sbjct: 522 GFPVYRRRDTGIYVEKNGFQCDNRYVIPYNEKLSLRYQAHINVEW 566


>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
           contains Pfam domain, PF00096: Zinc finger, C2H2 type
          Length = 499

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 245 VCNQXHTSLYSRTREEGKSDIYSDTECG*ITPQSW 349
           +CN    S  S++RE G SD  + T  G  + Q W
Sbjct: 7   LCNTNWGSSSSKSREPGSSDCGNSTFAGFTSQQKW 41


>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
           contains Pfam domain, PF00096: Zinc finger, C2H2 type
          Length = 499

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 245 VCNQXHTSLYSRTREEGKSDIYSDTECG*ITPQSW 349
           +CN    S  S++RE G SD  + T  G  + Q W
Sbjct: 7   LCNTNWGSSSSKSREPGSSDCGNSTFAGFTSQQKW 41


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,604,370
Number of Sequences: 28952
Number of extensions: 347373
Number of successful extensions: 962
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -