Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0987
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 33 0.29
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 31 0.90
SB_24606| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 31 1.2
SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 29 2.7
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 28 6.3
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 28 6.3
SB_47470| Best HMM Match : Pou (HMM E-Value=1.3e-22) 28 6.3
SB_34801| Best HMM Match : Vicilin_N (HMM E-Value=0.3) 28 8.4
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_18176| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035) 28 8.4
SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 28 8.4
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 391 PPPADSVVLPAATDAVATRDASPPPPVATATRDXGPP 501
PPP+ PAA A A+PPPP A PP
Sbjct: 53 PPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPP 89
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 346 KSSLDRHSFKLARVRPPPADSVVLPAATDAVATRDASPPPPVATATRDXGPP 501
+++ + KL +V PPP V+ ++ +V PPPP+ + T PP
Sbjct: 663 RTTTSQEQEKLKKVPPPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPP 714
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 391 PPPADSVVLPAATDAVATRDASPPPPVATATRDXGPPLRSVVGA 522
PPPA + A + AV T +PPP AT + PPL S G+
Sbjct: 559 PPPAPPPSVFAPSSAVPTPATAPPPVAATLSAP--PPLDSTSGS 600
>SB_24606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 307 LIFECFRF*VYFDKSSLDRHSFKLAR--VR---PPPADSVVLPAATDAVATRDASPPPPV 471
L+F+ + +Y+ + HSF+ R +R P + S +LP D R +PPPP+
Sbjct: 176 LLFQPTKHRMYYARPLASPHSFESCRKAIREDWPYGSASALLPKKADTFERRQHAPPPPI 235
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 382 RVRPPPADSVVLPAATDAVATRDASPPPPVATATRDXGPP 501
R P+ + P + ATR PPPP+A AT PP
Sbjct: 115 RAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPP 154
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 391 PP--PADSVVLPAATDAVATRDASPPPPVATATRDXGPP 501
PP PA P A AT PPPP+A AT PP
Sbjct: 129 PPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPP 167
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 391 PPPADSVVLPAATDAVATRDASPPPPVATATRDXGPP 501
PPP P A + + + PPPP + ATR PP
Sbjct: 110 PPPP-----PRAPETPSQAPSPPPPPTSPATRAPPPP 141
>SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05)
Length = 397
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 391 PPPADSVVLPAATDA---VATRDASPP--PPVATATRDXGPPLRSVVGADAAAIYLLL*S 555
P SV +P T VA+R PP PP ++ + PPL VG L+
Sbjct: 247 PSVKPSVPIPPPTKPPPRVASRRPPPPLPPPDSSEAQAQQPPLSPPVGKPVVPAALMNRP 306
Query: 556 SRGEKEF 576
+RGE+ F
Sbjct: 307 TRGERRF 313
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 391 PPPADSVVLPAATDAVATRDASPPPPVA---TATRDXGPP 501
PPP +P + + A PPPP++ T+TR PP
Sbjct: 320 PPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPP 359
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 391 PPPADSVVLPAATDAVATRDASPPPPVA---TATRDXGPP 501
PPP +P + + A PPPP++ T+TR PP
Sbjct: 232 PPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPP 271
>SB_47470| Best HMM Match : Pou (HMM E-Value=1.3e-22)
Length = 441
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 379 ARVRPPPADSVVLPAATDAVATRDASPPPPVATATRDXGP 498
A ++ PPA+ D V A P PPV+ A GP
Sbjct: 352 AILQSPPANVTYAQVTEDTVVQSSAPPGPPVSYAVSFVGP 391
>SB_34801| Best HMM Match : Vicilin_N (HMM E-Value=0.3)
Length = 451
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 358 DRHSFKLARVRPPPADSVVLPAATDAVATRDASPPPP 468
DRH F+L + P + S + + D +PPPP
Sbjct: 61 DRHDFELPLLLPRRSISTFSHQYNNQITKEDITPPPP 97
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 391 PPPADSVV-LPAATDAVATRDASPPPPVATAT 483
P P +SVV +PA T++V T A V TAT
Sbjct: 347 PAPTESVVTMPAPTESVVTMPAPTESVVTTAT 378
>SB_18176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 470 SLQRRATXARRSGLLLERTPPLYIYCCSPVAERKNFI 580
+L+RR T RR+G + CCSP+AER+ FI
Sbjct: 215 TLERR-TLLRRNGKPASQKKTCKS-CCSPIAERQEFI 249
>SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035)
Length = 671
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 385 VRPPPADSVVLPAATDAVATR--DASPPPPVA 474
+ PPP + LP + +R +ASPPPP A
Sbjct: 183 LHPPPGQASQLPLQEQSSGSRAEEASPPPPPA 214
>SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 407
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 391 PPPADSVV-LPAATDAVATRDASPPPPVATAT 483
P P +SVV +PA T++V T A V TAT
Sbjct: 99 PAPTESVVTMPAPTESVVTMPAPTESVVTTAT 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,348,918
Number of Sequences: 59808
Number of extensions: 408544
Number of successful extensions: 1443
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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