Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0987
         (698 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    31   3.0  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                31   3.0  
DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial l...    31   4.0  
BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein.        31   4.0  
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.         31   4.0  
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.        31   4.0  
AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein.     31   4.0  
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.     31   4.0  
U73682-1|AAB86589.1|  776|Homo sapiens meningioma-expressed anti...    31   5.2  
AF338233-1|AAN77610.1|  775|Homo sapiens CTAGE-5A protein protein.     31   5.2  
AF312918-1|AAG34121.1|  919|Homo sapiens MondoA protein.               30   6.9  
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase...    30   9.1  
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,...    30   9.1  
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,...    30   9.1  
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,...    30   9.1  
AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protei...    30   9.1  
AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein.     30   9.1  

>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 19/45 (42%), Positives = 20/45 (44%)
 Frame = +1

Query: 391 PPPADSVVLPAATDAVATRDASPPPPVATATRDXGPPLRSVVGAD 525
           PP AD   LP    +  TR A PPPP        GPP     GAD
Sbjct: 498 PPAADYPTLPPPPLSQPTRGAPPPPP----PPPPGPPPPPFTGAD 538


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 19/45 (42%), Positives = 20/45 (44%)
 Frame = +1

Query: 391 PPPADSVVLPAATDAVATRDASPPPPVATATRDXGPPLRSVVGAD 525
           PP AD   LP    +  TR A PPPP        GPP     GAD
Sbjct: 369 PPAADYPTLPPPPLSQPTRGAPPPPP----PPPPGPPPPPFTGAD 409


>DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial lining
            protein protein.
          Length = 1836

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +1

Query: 352  SLDRHSFKLARVRPPPADSVVLPAATDAVATRDA---SPPPPVATATRDXGPPLR 507
            S DRH+   +  RPP A S   P+    +    A    PPPPVAT+    GP  R
Sbjct: 919  STDRHA---SPARPPAARSQQHPSVPRRMTPGRAPQQQPPPPVATSQHHPGPQSR 970


>BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein.
          Length = 1773

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +1

Query: 352  SLDRHSFKLARVRPPPADSVVLPAATDAVATRDA---SPPPPVATATRDXGPPLR 507
            S DRH+   +  RPP A S   P+    +    A    PPPPVAT+    GP  R
Sbjct: 856  STDRHA---SPARPPAARSQQHPSVPRRMTPGRAPEQQPPPPVATSQHHPGPQSR 907


>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
          Length = 1250

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 391  PPPADSVVLPAATDAVATRDASPPPPVATATRD 489
            PPP  S+V P    +       PPPP A+ T D
Sbjct: 919  PPPESSLVFPPPPPSPVPAPPPPPPPTASPTPD 951


>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
          Length = 1250

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 391  PPPADSVVLPAATDAVATRDASPPPPVATATRD 489
            PPP  S+V P    +       PPPP A+ T D
Sbjct: 919  PPPESSLVFPPPPPSPVPAPPPPPPPTASPTPD 951


>AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein.
          Length = 1783

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +1

Query: 352  SLDRHSFKLARVRPPPADSVVLPAATDAVATRDA---SPPPPVATATRDXGPPLR 507
            S DRH+   +  RPP A S   P+    +    A    PPPPVAT+    GP  R
Sbjct: 866  STDRHA---SPARPPAARSQQHPSVPRRMTPGRAPEQQPPPPVATSQHHPGPQSR 917


>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
          Length = 1236

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 391  PPPADSVVLPAATDAVATRDASPPPPVATATRD 489
            PPP  S+V P    +       PPPP A+ T D
Sbjct: 905  PPPESSLVFPPPPPSPVPAPPPPPPPTASPTPD 937


>U73682-1|AAB86589.1|  776|Homo sapiens meningioma-expressed antigen
           11 protein.
          Length = 776

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +1

Query: 391 PPPADSVVLPAATDAVATRDASPPPPVATATRDXGPP 501
           PPP    +  A+ D    RD   PPP   A R+  PP
Sbjct: 692 PPPPPGAMFGASRDYFPPRDFPGPPPAPFAMRNVYPP 728


>AF338233-1|AAN77610.1|  775|Homo sapiens CTAGE-5A protein protein.
          Length = 775

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +1

Query: 391 PPPADSVVLPAATDAVATRDASPPPPVATATRDXGPP 501
           PPP    +  A+ D    RD   PPP   A R+  PP
Sbjct: 691 PPPPPGAMFGASRDYFPPRDFPGPPPAPFAMRNVYPP 727


>AF312918-1|AAG34121.1|  919|Homo sapiens MondoA protein.
          Length = 919

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +1

Query: 391 PPPADSVVLPAATDAVATRDASPPPPVATATRDXGPPLRSVV 516
           PPPA      AAT A A   A+PPPP A   R+  P  + ++
Sbjct: 40  PPPASG----AATPARAHASAAPPPPRAGPGREEPPRRQQII 77


>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
           transcription factor protein.
          Length = 1083

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = +1

Query: 394 PPADSVVLPAATDAVATRDASPPPP---VATATRDXGPPLRSVVGADA 528
           PPA +   P A  A A   A+PPPP    AT  R  G P      A A
Sbjct: 247 PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPA 294


>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,
           TATA box binding protein (TBP)-associated factor, 135kD
           protein.
          Length = 1085

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = +1

Query: 394 PPADSVVLPAATDAVATRDASPPPP---VATATRDXGPPLRSVVGADA 528
           PPA +   P A  A A   A+PPPP    AT  R  G P      A A
Sbjct: 249 PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPA 296


>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,
           TATA box binding protein (TBP)-associated factor, 135kD
           protein.
          Length = 1085

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = +1

Query: 394 PPADSVVLPAATDAVATRDASPPPP---VATATRDXGPPLRSVVGADA 528
           PPA +   P A  A A   A+PPPP    AT  R  G P      A A
Sbjct: 249 PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPA 296


>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,
           TATA box binding protein (TBP)-associated factor, 135kD
           protein.
          Length = 1085

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = +1

Query: 394 PPADSVVLPAATDAVATRDASPPPP---VATATRDXGPPLRSVVGADA 528
           PPA +   P A  A A   A+PPPP    AT  R  G P      A A
Sbjct: 249 PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPA 296


>AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protein 1
            protein.
          Length = 1431

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/49 (34%), Positives = 20/49 (40%)
 Frame = +1

Query: 388  RPPPADSVVLPAATDAVATRDASPPPPVATATRDXGPPLRSVVGADAAA 534
            R PPA     P    ++    A PP P A A      P R+   A AAA
Sbjct: 1305 RQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAA 1353


>AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein.
          Length = 1154

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/49 (34%), Positives = 20/49 (40%)
 Frame = +1

Query: 388  RPPPADSVVLPAATDAVATRDASPPPPVATATRDXGPPLRSVVGADAAA 534
            R PPA     P    ++    A PP P A A      P R+   A AAA
Sbjct: 1028 RQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAA 1076


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,997,649
Number of Sequences: 237096
Number of extensions: 1960851
Number of successful extensions: 8422
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8246
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)