Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0984
         (648 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein.              30   6.2  
U95204-1|AAB71380.1|  784|Homo sapiens platelet membrane glycopr...    30   6.2  
M20311-1|AAA60122.1|  788|Homo sapiens glycoprotein IIIa protein.      30   6.2  
L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein.              30   6.2  
J02703-1|AAA52589.1|  788|Homo sapiens ITGB3 protein.                  30   6.2  
AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein.          30   6.2  

>X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein.
          Length = 3002

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
 Frame = +1

Query: 7    CVTAYGALVCGTDYCEKNPCIQPPLVCP---KNTEHRXRHAGKCAC-CPACVTLLGEGAT 174
            C T Y   + GT   + N C Q P  C    KNTE      G   C CP    L  +G +
Sbjct: 2560 CKTGYTPDITGTSCVDLNECNQAPKPCNFICKNTE------GSYQCSCPKGYILQEDGRS 2613

Query: 175  CK 180
            CK
Sbjct: 2614 CK 2615


>U95204-1|AAB71380.1|  784|Homo sapiens platelet membrane
           glycoprotein IIIa beta subunit protein.
          Length = 784

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
 Frame = +1

Query: 7   CVTAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRXRHAGKCACCPACVTLLGEGATCKIY 186
           C+++ G L  G   CE   C     VC +   +      KC  CP   T   E   CK +
Sbjct: 593 CMSSNGLLCSGRGKCECGSC-----VCIQPGSYGDT-CEKCPTCPDACTFKKECVECKKF 646

Query: 187 SKE---LGETPSAVCKEPLKCIKRV 252
            +E      T +  C++ ++ +K +
Sbjct: 647 DREPYMTENTCNRYCRDEIESVKEL 671


>M20311-1|AAA60122.1|  788|Homo sapiens glycoprotein IIIa protein.
          Length = 788

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
 Frame = +1

Query: 7   CVTAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRXRHAGKCACCPACVTLLGEGATCKIY 186
           C+++ G L  G   CE   C     VC +   +      KC  CP   T   E   CK +
Sbjct: 593 CMSSNGLLCSGRGKCECGSC-----VCIQPGSYGDT-CEKCPTCPDACTFKKECVECKKF 646

Query: 187 SKE---LGETPSAVCKEPLKCIKRV 252
            +E      T +  C++ ++ +K +
Sbjct: 647 DREPYMTENTCNRYCRDEIESVKEL 671


>L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein.
          Length = 2871

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
 Frame = +1

Query: 7    CVTAYGALVCGTDYCEKNPCIQPPLVCP---KNTEHRXRHAGKCAC-CPACVTLLGEGAT 174
            C T Y   + GT   + N C Q P  C    KNTE      G   C CP    L  +G +
Sbjct: 2429 CKTGYTPDITGTSCVDLNECNQAPKPCNFICKNTE------GSYQCSCPKGYILQEDGRS 2482

Query: 175  CK 180
            CK
Sbjct: 2483 CK 2484


>J02703-1|AAA52589.1|  788|Homo sapiens ITGB3 protein.
          Length = 788

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
 Frame = +1

Query: 7   CVTAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRXRHAGKCACCPACVTLLGEGATCKIY 186
           C+++ G L  G   CE   C     VC +   +      KC  CP   T   E   CK +
Sbjct: 593 CMSSNGLLCSGRGKCECGSC-----VCIQPGSYGDT-CEKCPTCPDACTFKKECVECKKF 646

Query: 187 SKE---LGETPSAVCKEPLKCIKRV 252
            +E      T +  C++ ++ +K +
Sbjct: 647 DREPYMTENTCNRYCRDEIESVKEL 671


>AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein.
          Length = 2871

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
 Frame = +1

Query: 7    CVTAYGALVCGTDYCEKNPCIQPPLVCP---KNTEHRXRHAGKCAC-CPACVTLLGEGAT 174
            C T Y   + GT   + N C Q P  C    KNTE      G   C CP    L  +G +
Sbjct: 2429 CKTGYTPDITGTSCVDLNECNQAPKPCNFICKNTE------GSYQCSCPKGYILQEDGRS 2482

Query: 175  CK 180
            CK
Sbjct: 2483 CK 2484


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,411,795
Number of Sequences: 237096
Number of extensions: 1866749
Number of successful extensions: 3574
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3571
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)