Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0984
(648 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 24 1.5
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 3.4
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 4.4
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 4.4
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 4.4
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 4.4
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 4.4
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 4.4
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 4.4
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 4.4
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 4.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.4
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 5.9
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 283 QENISLQYFYHDL-FEI*FVYGIKLIIICTV 372
++N+ + Y D + I F Y I LI++CTV
Sbjct: 802 EDNLLVCNSYVDASYMIAFAYPIMLIVVCTV 832
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3
Query: 169 HLHQVKLHKRDNKHTFQRVWXDAQ 98
++ +VK K +KH Q W D +
Sbjct: 325 YIPKVKNKKAGSKHLLQNTWLDPE 348
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 542 NLHNY*RLMRIYNYTRRVTYIVPI 471
N HNY +L NY ++ VP+
Sbjct: 102 NKHNYNKLYYNINYIEQIPIPVPV 125
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 542 NLHNY*RLMRIYNYTRRVTYIVPI 471
N HNY +L NY ++ VP+
Sbjct: 102 NKHNYNKLYYNINYIEQIPIPVPV 125
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 542 NLHNY*RLMRIYNYTRRVTYIVPI 471
N HNY +L NY ++ VP+
Sbjct: 102 NKHNYNKLYYNINYIEQIPIPVPV 125
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 542 NLHNY*RLMRIYNYTRRVTYIVPI 471
N HNY +L NY ++ VP+
Sbjct: 102 NKHNYNKLYYNINYIEQIPIPVPV 125
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 542 NLHNY*RLMRIYNYTRRVTYIVPI 471
N HNY +L NY ++ VP+
Sbjct: 102 NKHNYNKLYYNINYIEQIPIPVPV 125
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 542 NLHNY*RLMRIYNYTRRVTYIVPI 471
N HNY +L NY ++ VP+
Sbjct: 102 NKHNYNKLYYNINYIEQIPIPVPV 125
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 542 NLHNY*RLMRIYNYTRRVTYIVPI 471
N HNY +L NY ++ VP+
Sbjct: 102 NKHNYNKLYYNINYIEQIPIPVPV 125
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 542 NLHNY*RLMRIYNYTRRVTYIVPI 471
N HNY +L NY ++ VP+
Sbjct: 102 NKHNYNKLYYNINYIEQIPIPVPV 125
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 542 NLHNY*RLMRIYNYTRRVTYIVPI 471
N HNY +L NY ++ VP+
Sbjct: 102 NKHNYNKLYYNINYIEQIPIPVPV 125
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 542 NLHNY*RLMRIYNYTRRVTYIVPI 471
N HNY +L NY ++ VP+
Sbjct: 335 NKHNYNKLYYNINYIEQIPIPVPV 358
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 542 NLHNY*RLMRIYNYTRRVTYIVPI 471
N HNY +L NY ++ VP+
Sbjct: 335 NKHNYNKLYYNINYIEQIPIPVPV 358
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 628 YQIWGNVTLNFFFITN 581
Y++ NV NF FIT+
Sbjct: 311 YEVGSNVPFNFKFITD 326
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,652
Number of Sequences: 438
Number of extensions: 4244
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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