SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0983
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.59 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.8  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   1.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   1.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.7  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   9.7  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   9.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 160 KLVKNFQRLTHFL*YWRYKCSRHFFCHRIFSVITEWLQY 276
           KL K   +L H L +  YK ++ F    +F VI  W+ +
Sbjct: 110 KLHKLDNKLKHMLIWKSYKRTQIFITCELFFVILLWISF 148


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -2

Query: 658 KTSSVLSFRPTTTTIINIVLSVYKMRTTMCQNVIANFNGILCFF 527
           K   ++  R   T II++V+        + Q+ + N NG+L  F
Sbjct: 410 KEPLLIKVRLLQTLIISLVIGAIYFGQDLNQDGVMNINGVLFVF 453


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -2

Query: 658 KTSSVLSFRPTTTTIINIVLSVYKMRTTMCQNVIANFNGILCFF 527
           K   ++  R   T II++V+        + Q+ + N NG+L  F
Sbjct: 410 KEPLLIKVRLLQTLIISLVIGAIYFGQDLNQDGVMNINGVLFVF 453


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 88  EYDPTQCAHLLVALIFHNENYRFPKLVKN 174
           + DPT C HL+ + +   ++ R   L  N
Sbjct: 43  DIDPTLCTHLIYSFVGLGDDSRIKHLEPN 71


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 88  EYDPTQCAHLLVALI 132
           + DPT C HLL A +
Sbjct: 44  DVDPTLCTHLLYAFV 58


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +1

Query: 241 RIFSVITEWLQY*RIIYNICTK 306
           ++ +V+T+W+ + RI Y +  K
Sbjct: 154 KLANVVTDWVNFERIYYKLTKK 175


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 111 AFVGCINFSQ*KL*VSKTCKKLSKV 185
           AF GC+   Q K      CK  SKV
Sbjct: 11  AFFGCVRAQQLKGNQEDPCKLKSKV 35


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 221 HVIFSVTEYFQSLQSGFSIEGSY 289
           H+I +   ++Q L+S F  +G Y
Sbjct: 89  HLIENKPNWWQELESKFDPQGEY 111


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 221 HVIFSVTEYFQSLQSGFSIEGSY 289
           H+I +   ++Q L+S F  +G Y
Sbjct: 89  HLIENKPNWWQELESKFDPQGEY 111


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 145 FHCEKLMQPTNAHIEWDHTH 86
           +H      PTN+ +E+ H H
Sbjct: 144 YHLGASSTPTNSCMEYQHLH 163


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 145 FHCEKLMQPTNAHIEWDHTH 86
           +H      PTN+ +E+ H H
Sbjct: 144 YHLGASSTPTNSCMEYQHLH 163


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 145 FHCEKLMQPTNAHIEWDHTH 86
           +H      PTN+ +E+ H H
Sbjct: 144 YHLGASSTPTNSCMEYQHLH 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,043
Number of Sequences: 336
Number of extensions: 3632
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -