Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0983
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0308 + 2434642-2434736,2435176-2435245,2435435-2435566,243...    38   0.008
10_08_1052 - 22567937-22568329,22568436-22568669,22568787-225691...    30   2.0  
02_01_0151 + 1067067-1067222,1067586-1067690,1067904-1067990,106...    29   2.7  
09_04_0292 - 16436918-16439233                                         29   4.7  
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686     29   4.7  
04_04_0097 - 22782031-22782122,22782504-22782570,22782769-227828...    28   8.2  

>05_01_0308 +
           2434642-2434736,2435176-2435245,2435435-2435566,
           2435659-2435722,2435786-2435855,2435952-2436036,
           2437572-2437628,2437894-2438010,2438267-2438337,
           2438703-2439045
          Length = 367

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
 Frame = -3

Query: 363 KMLDWNEIT--DLPNKRPDVILGADIVYDP 280
           K L W E +  DL + RPD++LGADI+YDP
Sbjct: 234 KYLSWEETSESDLWDCRPDLVLGADIIYDP 263


>10_08_1052 -
           22567937-22568329,22568436-22568669,22568787-22569111,
           22569239-22569484,22569576-22569916,22570070-22570150,
           22570275-22570394,22570549-22570650,22570900-22571035,
           22571210-22571362,22572605-22572906
          Length = 810

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 112 HLLVALIFHNENYRFPKLVKNFQRLTHFL*YWRYKCSRH 228
           H L     +N N R+ KLVK  +RL ++L Y++ K  RH
Sbjct: 226 HYLGQQAVYNAN-RYAKLVKKKERLQNWLDYYQLKFERH 263


>02_01_0151 +
           1067067-1067222,1067586-1067690,1067904-1067990,
           1068071-1068121,1068265-1068291,1068292-1068385,
           1068610-1068845
          Length = 251

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -3

Query: 354 DWNEIT-DLPNKRPDVILGADIVYD 283
           +W+E T DL    PDVILGAD++YD
Sbjct: 150 EWDEPTFDL---HPDVILGADVLYD 171


>09_04_0292 - 16436918-16439233
          Length = 771

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -2

Query: 676 VASLDTKTSSVL-SFRPTTTTIINIVLSVYKMRTTMCQNVIA 554
           V SL T  SSVL  +RP+TT  +NI++  + +   + + V+A
Sbjct: 354 VTSLFTLFSSVLLHYRPSTTAKVNIIIHSFNLDLFVTRLVVA 395


>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
          Length = 959

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 269 FSIEGSYTISAPSITSGLLFGRSVISFQSNIL 364
           F  E   T+SAP++  G++FG+ +   +S ++
Sbjct: 301 FKCEFDLTLSAPTVEQGMVFGKELFGQESGLV 332


>04_04_0097 -
           22782031-22782122,22782504-22782570,22782769-22782861,
           22782981-22783034,22783163-22783214,22783346-22783413,
           22783532-22783711,22783843-22783935,22784585-22784665,
           22785011-22785091,22785204-22785331,22786502-22786643
          Length = 376

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
 Frame = +2

Query: 209 DINVHVI----FSVTEYFQSLQSG 268
           DIN H+I    FSVTE+F+S +SG
Sbjct: 283 DINEHIILSNQFSVTEHFRSSESG 306


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,243,123
Number of Sequences: 37544
Number of extensions: 309278
Number of successful extensions: 803
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)