Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0983
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2672|AAF49513.1| 597|Drosophila melanogaster CG4950-PA... 31 1.1
AY865078-2|AAW79487.1| 629|Drosophila melanogaster SR-CI protein. 30 3.5
AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein. 30 3.5
AY865076-2|AAW79483.1| 629|Drosophila melanogaster SR-CI protein. 30 3.5
AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein. 30 3.5
AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein. 30 3.5
AY865071-2|AAW79474.1| 629|Drosophila melanogaster SR-CI protein. 30 3.5
AY865063-2|AAW79458.1| 629|Drosophila melanogaster SR-CI protein. 30 3.5
AY864369-1|AAX38007.1| 572|Drosophila melanogaster scavenger re... 30 3.5
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 29 8.0
>AE014296-2672|AAF49513.1| 597|Drosophila melanogaster CG4950-PA
protein.
Length = 597
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +2
Query: 341 ISFQSNILTSVSESPVKIGPAVPEISNSTNIV*FICCAIKNRFSSVINIKLETEYQELVN 520
+SF+ N+LTS+ + + E++ S N + FI +S+ N+ L Y EL N
Sbjct: 218 VSFEGNLLTSIQPEVFRNMRRIKEVNLSNNRLIFIHPDTFADAASLENLVL--SYNELKN 275
Query: 521 FKKKAKNSV 547
F+ KN V
Sbjct: 276 FQLTEKNIV 284
>AY865078-2|AAW79487.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 685 TGTVASLDTKTSSVLSFRPTTTTIINIVLSVYKMRTTM 572
T T T T+S S PTTTT IN+ + K TTM
Sbjct: 464 TSTTPKSTTSTTSTTSTTPTTTTTINVFTT--KKTTTM 499
>AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 685 TGTVASLDTKTSSVLSFRPTTTTIINIVLSVYKMRTTM 572
T T T T+S S PTTTT IN+ + K TTM
Sbjct: 464 TSTTPKSTTSTTSTTSTTPTTTTTINVFTT--KKTTTM 499
>AY865076-2|AAW79483.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 685 TGTVASLDTKTSSVLSFRPTTTTIINIVLSVYKMRTTM 572
T T T T+S S PTTTT IN+ + K TTM
Sbjct: 464 TSTTPKSTTSTTSTTSTTPTTTTTINVFTT--KKTTTM 499
>AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 685 TGTVASLDTKTSSVLSFRPTTTTIINIVLSVYKMRTTM 572
T T T T+S S PTTTT IN+ + K TTM
Sbjct: 464 TSTTPKSTTSTTSTTSTTPTTTTTINVFTT--KKTTTM 499
>AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 685 TGTVASLDTKTSSVLSFRPTTTTIINIVLSVYKMRTTM 572
T T T T+S S PTTTT IN+ + K TTM
Sbjct: 464 TSTTPKSTTSTTSTTSTTPTTTTTINVFTT--KKTTTM 499
>AY865071-2|AAW79474.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 685 TGTVASLDTKTSSVLSFRPTTTTIINIVLSVYKMRTTM 572
T T T T+S S PTTTT IN+ + K TTM
Sbjct: 464 TSTTPKSTTSTTSTTSTTPTTTTTINVFTT--KKTTTM 499
>AY865063-2|AAW79458.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 685 TGTVASLDTKTSSVLSFRPTTTTIINIVLSVYKMRTTM 572
T T T T+S S PTTTT IN+ + K TTM
Sbjct: 464 TSTTPKSTTSTTSTTSTTPTTTTTINVFTT--KKTTTM 499
>AY864369-1|AAX38007.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 685 TGTVASLDTKTSSVLSFRPTTTTIINIVLSVYKMRTTM 572
T T T T+S S PTTTT IN+ + K TTM
Sbjct: 407 TSTTPKSTTSTTSTTSTTPTTTTTINVFTT--KKTTTM 442
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 378 SLTDVKMLDWNEITDLPNKRPDVILGADIVYDPSIL 271
SL D+ L W + T + + DV++GADI+ PSI+
Sbjct: 643 SLKDLPALRWADPTFFESSQIDVLIGADIL--PSIM 676
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,344,143
Number of Sequences: 53049
Number of extensions: 574886
Number of successful extensions: 1309
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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