Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0983
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g27400.1 68418.m03271 expressed protein hypothetical proteins... 37 0.011
At4g26030.1 68417.m03748 hypothetical protein 30 1.3
At3g29220.1 68416.m03665 hypothetical protein 30 1.7
At3g50850.1 68416.m05568 expressed protein 29 2.2
At3g46290.1 68416.m05010 protein kinase, putative similar to rec... 29 3.0
At1g63855.3 68414.m07228 expressed protein 29 3.0
At1g63855.1 68414.m07229 expressed protein 29 3.0
At1g15110.1 68414.m01804 phosphatidyl serine synthase family pro... 29 3.0
At1g08125.1 68414.m00891 Expressed protein 29 3.9
At3g12420.1 68416.m01547 hypothetical protein 28 5.2
At1g27660.1 68414.m03381 ethylene-responsive protein -related co... 28 5.2
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 28 6.8
At3g42730.1 68416.m04462 Ulp1 protease family protein contains P... 28 6.8
At3g48460.1 68416.m05290 GDSL-motif lipase/hydrolase family prot... 27 9.0
>At5g27400.1 68418.m03271 expressed protein hypothetical proteins -
different species
Length = 369
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = -3
Query: 339 TDLPNKRPDVILGADIVYDPSILKPL 262
++L RPD++LGAD++YDPS L L
Sbjct: 249 SELSQYRPDIVLGADVIYDPSCLPHL 274
>At4g26030.1 68417.m03748 hypothetical protein
Length = 220
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 440 FICCAIKNRFSSVINIKLETEYQELVNFKKKAKNSVKIGNHILAHCSSHFINRQDNINNR 619
FIC + F + + + TE L++ K + K +K+ +H H SH IN+
Sbjct: 158 FICLKCNSLFDTSQMLVVHTE---LIHSKNETKKRLKL-HHQEFHGKSHKINKDQTGGQS 213
Query: 620 CRR 628
CRR
Sbjct: 214 CRR 216
>At3g29220.1 68416.m03665 hypothetical protein
Length = 197
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +2
Query: 500 EYQELVNFKKKAKNSVKIGNHILAHCSSHFINRQDNINNR 619
+ E ++ + KAK + + +H+ H + +I R+DN++ R
Sbjct: 40 DVSETISDESKAKAMIFLHHHLHDHLKNEYITREDNVDLR 79
>At3g50850.1 68416.m05568 expressed protein
Length = 251
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 366 VKMLDWNEITDLPN--KRPDVILGADIVYDPSILKPLCND*KYSVTE 232
V L W EI D+ + + D+IL +D+VY + +PL ++ + E
Sbjct: 146 VASLRWGEIDDVESLGQNVDLILASDVVYHVHLYEPLLKTLRFLLLE 192
>At3g46290.1 68416.m05010 protein kinase, putative similar to
receptor-like protein kinase [Catharanthus roseus]
gi|1644291|emb|CAA97692
Length = 830
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 224 VIFSVTEYFQSLQSGFSIEGSYTISAPSITSGLLFGRSVIS--FQSNILTSVSESPVKIG 397
++ S + GF+ +Y I+ S T+G L GR +S S +LTS E +G
Sbjct: 10 ILISTISILLCICHGFTPVDNYLINCGSPTNGTLMGRIFLSDKLSSKLLTSSKEILASVG 69
>At1g63855.3 68414.m07228 expressed protein
Length = 196
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = -3
Query: 357 LDWNEITDLP--NKRPDVILGADIVYDPS 277
L W + D P + RP++ILGAD++YD S
Sbjct: 113 LTWG-VWDAPILDLRPNIILGADVLYDSS 140
>At1g63855.1 68414.m07229 expressed protein
Length = 159
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = -3
Query: 357 LDWNEITDLP--NKRPDVILGADIVYDPS 277
L W + D P + RP++ILGAD++YD S
Sbjct: 113 LTWG-VWDAPILDLRPNIILGADVLYDSS 140
>At1g15110.1 68414.m01804 phosphatidyl serine synthase family
protein contains Pfam profile: PF03034 phosphatidyl
serine synthase
Length = 425
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = -2
Query: 604 VLSV-YKMRTTMCQNVIANFNGILCFFFKIHKLLVFCF*FDIYH*TKTI--FDGTTYELD 434
VLS+ +++ ++++ NFN C++ I ++ C F I+ T+ FDG TYE
Sbjct: 201 VLSIGFELLEVTFRHMLPNFNE--CWWDSIVLDILICNWFGIWAGMYTVRYFDGKTYEWV 258
Query: 433 NVSRVANL 410
+SR N+
Sbjct: 259 GISRQPNI 266
>At1g08125.1 68414.m00891 Expressed protein
Length = 315
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 366 VKMLDWNEITDLPNKRP--DVILGADIVYDPSILKPL 262
V LDW + P D ++G D+VY +L+PL
Sbjct: 126 VAELDWGNEDHITAVEPPFDYVIGTDVVYSEQLLEPL 162
>At3g12420.1 68416.m01547 hypothetical protein
Length = 308
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 247 FSVITEWLQY*RIIYNICTKYYIGPFIW*IG 339
F++I++W+ + YN C YY+ P + +G
Sbjct: 34 FAIISQWIH--EVEYNNCRPYYLQPLVVGVG 62
>At1g27660.1 68414.m03381 ethylene-responsive protein -related
contains similarity to ethylene-inducible ER33 protein
[Lycopersicon esculentum] gi|5669656|gb|AAD46413
Length = 453
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 212 INVHVIFSVTEYFQSLQSGFSIEGSYTISAPSITS 316
IN H ++ +S+ SGF I G Y S PS +S
Sbjct: 150 INEHKDYTEKLLLKSMSSGFPINGDYGSSLPSSSS 184
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2
Query: 254 SLQSGFSIEGSYTISAPSITSGLLFGRSVISFQSNILTSVSESPVKIGPAVPEISNS 424
SL FS GS+ A +I +L R S S+I +SES + ++ NS
Sbjct: 128 SLAEAFSFRGSFQNRAKNIDDQILLTRDYSSNSSSIAEGLSESDSSRFDSYGDLPNS 184
>At3g42730.1 68416.m04462 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1314
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 426 VELLISGTAGPILTGLSLTDVKMLDWNEITDL--PNKRPDVILGADIVYDPSILK 268
+ELL G LT + TD+ D+ +KR D G DIVY P +LK
Sbjct: 1152 LELLAFGHPFSELTTIRETDMVFYRQKYSVDIYEHSKREDGTRGRDIVYRPDVLK 1206
>At3g48460.1 68416.m05290 GDSL-motif lipase/hydrolase family protein
similar to lipase [Arabidopsis thaliana] GI:1145627;
contains InterPro Entry IPR001087 Lipolytic enzyme,
G-D-S-L family
Length = 381
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -2
Query: 166 QVLETYNFHCEKLMQPTNAHIEWDHTHINRCLLKIM 59
QV +T + + N +I WD H+ + K+M
Sbjct: 321 QVFQTCGTDAATVCKDPNQYINWDGVHLTEAMYKVM 356
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,964,207
Number of Sequences: 28952
Number of extensions: 280232
Number of successful extensions: 683
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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