Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0981
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 33 0.29
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 32 0.51
SB_24606| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 2.1
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.1
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 2.1
SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 29 3.6
SB_34801| Best HMM Match : Vicilin_N (HMM E-Value=0.3) 28 8.4
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035) 28 8.4
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 28 8.4
SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 28 8.4
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 394 PPPADSVVLPAATDAVATRDASPPPPVATATRDGGPP 504
PPP+ PAA A A+PPPP A PP
Sbjct: 53 PPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPP 89
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 385 RVRPPPADSVVLPAATDAVATRDASPPPPVATATRDGGPP 504
R P+ + P + ATR PPPP+A AT GGPP
Sbjct: 115 RAPETPSQAPSPPPPPTSPATRAPPPPPPIAPAT--GGPP 152
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/39 (48%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 394 PP--PADSVVLPAATDAVATRDASPPPPVATATRDGGPP 504
PP PA P A AT PPPP+A AT GGPP
Sbjct: 129 PPTSPATRAPPPPPPIAPATGGPPPPPPIAPAT--GGPP 165
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 397 PPADSVVLPAAT---DAVATRDASPPPPVATATRDGGPP 504
PP + PAAT AV ASPPPP GGPP
Sbjct: 164 PPPPPPIAPAATVPAPAVPLAAASPPPP------SGGPP 196
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 349 KSSLDRHSFKLARVRPPPADSVVLPAATDAVATRDASPPPPVATATRDGGPP 504
+++ + KL +V PPP V+ ++ +V PPPP+ + T PP
Sbjct: 663 RTTTSQEQEKLKKVPPPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPP 714
>SB_24606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 310 LIFECFRF*VYFDKSSLDRHSFKLAR--VR---PPPADSVVLPAATDAVATRDASPPPPV 474
L+F+ + +Y+ + HSF+ R +R P + S +LP D R +PPPP+
Sbjct: 176 LLFQPTKHRMYYARPLASPHSFESCRKAIREDWPYGSASALLPKKADTFERRQHAPPPPI 235
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 385 RVRPPPADSVVLPAATDAVATRDASPPPPVATATRDGGPP 504
++ PPP P + +TR A PPPP GGPP
Sbjct: 338 QIAPPPP-----PISKPPTSTRSAPPPPPGRAPQPLGGPP 372
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 394 PPPADSVVLPAATDAVATRDASPPPPVA---TATRDGGPP 504
PPP +P + + A PPPP++ T+TR PP
Sbjct: 320 PPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPP 359
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 394 PPPADSVVLPAATDAVATRDASPPPPVATATRDGGPPLRAVVGA 525
PPPA + A + AV T +PPP AT PPL + G+
Sbjct: 559 PPPAPPPSVFAPSSAVPTPATAPPP--VAATLSAPPPLDSTSGS 600
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 385 RVRPPPADSVVLPAATDAVATRDASPPPPVATATRDGGPP 504
++ PPP P + +TR A PPPP GGPP
Sbjct: 250 QIAPPPP-----PISKPPTSTRSAPPPPPGRAPQPLGGPP 284
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 394 PPPADSVVLPAATDAVATRDASPPPPVA---TATRDGGPP 504
PPP +P + + A PPPP++ T+TR PP
Sbjct: 232 PPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPP 271
>SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05)
Length = 397
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 394 PPPADSVVLPAATDA---VATRDASPP--PPVATATRDGGPPLRAVVGADAAAIYLLL*S 558
P SV +P T VA+R PP PP ++ + PPL VG L+
Sbjct: 247 PSVKPSVPIPPPTKPPPRVASRRPPPPLPPPDSSEAQAQQPPLSPPVGKPVVPAALMNRP 306
Query: 559 SRGEKEF 579
+RGE+ F
Sbjct: 307 TRGERRF 313
>SB_34801| Best HMM Match : Vicilin_N (HMM E-Value=0.3)
Length = 451
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 361 DRHSFKLARVRPPPADSVVLPAATDAVATRDASPPPP 471
DRH F+L + P + S + + D +PPPP
Sbjct: 61 DRHDFELPLLLPRRSISTFSHQYNNQITKEDITPPPP 97
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 394 PPPADSVV-LPAATDAVATRDASPPPPVATAT 486
P P +SVV +PA T++V T A V TAT
Sbjct: 347 PAPTESVVTMPAPTESVVTMPAPTESVVTTAT 378
>SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035)
Length = 671
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 388 VRPPPADSVVLPAATDAVATR--DASPPPPVA 477
+ PPP + LP + +R +ASPPPP A
Sbjct: 183 LHPPPGQASQLPLQEQSSGSRAEEASPPPPPA 214
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +1
Query: 394 PPPAD-SVVLPAATDAVATRDASPPPPVATATRDGGPP 504
PPPAD S P PPPP DGG P
Sbjct: 294 PPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAP 331
>SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 407
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 394 PPPADSVV-LPAATDAVATRDASPPPPVATAT 486
P P +SVV +PA T++V T A V TAT
Sbjct: 99 PAPTESVVTMPAPTESVVTMPAPTESVVTTAT 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,434,365
Number of Sequences: 59808
Number of extensions: 406652
Number of successful extensions: 1523
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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