Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0981
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z71264-3|CAA95827.1|  325|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical...    28   5.6  
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ...    28   5.6  
Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical...    28   7.4  
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical...    28   7.4  
Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical p...    27   9.8  
AL110471-2|CAB63306.1|  479|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ...    27   9.8  
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut...    27   9.8  
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical...    27   9.8  
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical...    27   9.8  

>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
           protein C46C2.1b protein.
          Length = 1677

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 421 PAATDAVATRDASPPPPVATATRDGG 498
           P+ATD  +T     P P  T T DGG
Sbjct: 899 PSATDVASTTAPVTPAPTPTTTTDGG 924


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
           protein C46C2.1a protein.
          Length = 1838

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 421 PAATDAVATRDASPPPPVATATRDGG 498
           P+ATD  +T     P P  T T DGG
Sbjct: 899 PSATDVASTTAPVTPAPTPTTTTDGG 924


>Z71264-3|CAA95827.1|  325|Caenorhabditis elegans Hypothetical
           protein K07G5.4 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 439 VATRDASPPPPVATATRDGGPPLRAVVGADAAAIY 543
           +++ +ASPPPP  + TR    P   +  + + AIY
Sbjct: 221 ISSSEASPPPPRPSITRTESVPRSILKNSSSFAIY 255


>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
           protein Y59A8B.1a protein.
          Length = 1641

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 397 PPADSVVLPAATDAVATRDASPPPP 471
           PP    V+ A+  A A RD  PPPP
Sbjct: 182 PPPQPPVMTASAAAAAYRDRLPPPP 206


>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
           protein R148.3a protein.
          Length = 1115

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +1

Query: 394 PPPA-DSVVLPAATDAVATRDASPPPPVATATRDGGPPLRAVVGADAAAI 540
           P PA D VV PA  +       +PPPP      +   P  A   A  A I
Sbjct: 357 PAPAEDPVVTPAPEELTTPPPPAPPPPAPAVPEEAQAPTPAPEEAPEAQI 406


>Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -3

Query: 537 SGGVRSNNSTERRAPVARRCSDWWRRAGVARRYS 436
           +GG R N+S   R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -3

Query: 537 SGGVRSNNSTERRAPVARRCSDWWRRAGVARRYS 436
           +GG R N+S   R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 394 PPPADSVVLPAATDAVATRDASPPPPVATATRDGGPP 504
           PPP    + P +T A      +PPPP      +GGPP
Sbjct: 521 PPPPMPGMAPLSTGA-----PTPPPPPPVGMANGGPP 552


>AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -3

Query: 537 SGGVRSNNSTERRAPVARRCSDWWRRAGVARRYS 436
           +GG R N+S   R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -3

Query: 537 SGGVRSNNSTERRAPVARRCSDWWRRAGVARRYS 436
           +GG R N+S   R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical protein
            F36G9.13 protein.
          Length = 917

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 22/67 (32%), Positives = 30/67 (44%)
 Frame = +1

Query: 316  FECFRF*VYFDKSSLDRHSFKLARVRPPPADSVVLPAATDAVATRDASPPPPVATATRDG 495
            F  FRF    ++S+  +HS K+    PPP  +   PA T   A      P PV+ A  D 
Sbjct: 827  FFFFRFVARREQSA--QHSVKVPPPPPPPVPTAP-PAKTPETAP--LLVPKPVSNAENDA 881

Query: 496  GPPLRAV 516
              P  +V
Sbjct: 882  AKPTESV 888


>Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical
           protein F47B8.13 protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 394 PPPADSVVLPAATDAVATRDASPPPPVATA 483
           PPPAD+   PA   A A    + P P A A
Sbjct: 41  PPPADAAPAPAPEPAPAPAPEAVPAPAADA 70


>AL110471-2|CAB63306.1|  479|Caenorhabditis elegans Hypothetical
           protein T06D10.2 protein.
          Length = 479

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 522 SNNSTERRAPVARRCSDWWRRAG 454
           S ++ ER+A +A+R  DW +R G
Sbjct: 423 STDAAERKARLAQRAEDWAKRTG 445


>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
           protein.
          Length = 1497

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 495 PVARRCSDWWRRAGVARRYSV 433
           P  R C +WW    + + YSV
Sbjct: 356 PALRLCQNWWNAQDIVKEYSV 376


>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered
           cuticle protein 3 protein.
          Length = 1497

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 495 PVARRCSDWWRRAGVARRYSV 433
           P  R C +WW    + + YSV
Sbjct: 356 PALRLCQNWWNAQDIVKEYSV 376


>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
           protein F53G12.3 protein.
          Length = 1503

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 495 PVARRCSDWWRRAGVARRYSV 433
           P  R C +WW    + + YSV
Sbjct: 366 PALRLCQNWWNAQDIVKEYSV 386


>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.31 protein.
          Length = 1219

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 43  IKLCDCRINVCRWLLHDTIVEMLSSGTCCVHECSQ 147
           I+ C+  ++ CRW L +  V   S+ +C   EC+Q
Sbjct: 499 IRRCES-VDECRWHLGELRVRCASTASCQREECAQ 532


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,995,301
Number of Sequences: 27780
Number of extensions: 302244
Number of successful extensions: 1258
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)