Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0980
         (585 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carot...    38   0.17 
UniRef50_Q3V1I2 Cluster: 0 day neonate skin cDNA, RIKEN full-len...    35   1.6  
UniRef50_Q4TA56 Cluster: Chromosome undetermined SCAF7448, whole...    33   3.8  
UniRef50_A7K920 Cluster: Putative uncharacterized protein z410R;...    33   3.8  
UniRef50_Q00YI7 Cluster: Chromosome 11 contig 1, DNA sequence; n...    33   6.6  
UniRef50_Q5UQ54 Cluster: Uncharacterized protein L712; n=1; Acan...    32   8.7  

>UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus
           carota|Rep: Glycine-rich protein - Daucus carota
           (Carrot)
          Length = 111

 Score = 37.9 bits (84), Expect = 0.17
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 566 WCWFRSWCWIRSRSRKWSCPXXXXXXXARNRLFW 465
           WCW+R  CWI SR R W           R R +W
Sbjct: 41  WCWWRCRCWIWSRLRSWCRSRRRIRWRRRRRRWW 74



 Score = 33.1 bits (72), Expect = 5.0
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 4/25 (16%)
 Frame = -2

Query: 584 WCWFRSWCW----FRSWCWIRSRSR 522
           WCW+R  CW     RSWC  R R R
Sbjct: 41  WCWWRCRCWIWSRLRSWCRSRRRIR 65


>UniRef50_Q3V1I2 Cluster: 0 day neonate skin cDNA, RIKEN full-length
           enriched library, clone:4632427I20 product:hypothetical
           Tryptophan-rich region profile/4Fe-4S ferredoxin,
           iron-sulfur binding domain containing protein, full
           insert sequence; n=2; Mus musculus|Rep: 0 day neonate
           skin cDNA, RIKEN full-length enriched library,
           clone:4632427I20 product:hypothetical Tryptophan-rich
           region profile/4Fe-4S ferredoxin, iron-sulfur binding
           domain containing protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 300

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 584 WCWFRSWCWFRSWCWIRSRSR 522
           WCW+  WCW   WCW R   R
Sbjct: 132 WCWWCWWCW---WCWWRCGCR 149


>UniRef50_Q4TA56 Cluster: Chromosome undetermined SCAF7448, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF7448,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 548

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 584 WCWFRSWCWFRSWCWIRSRSRKW 516
           W W   W W  +W W  +R+R W
Sbjct: 299 WAWACVWAWAWAWAWAWARARAW 321


>UniRef50_A7K920 Cluster: Putative uncharacterized protein z410R;
           n=1; Chlorella virus ATCV-1|Rep: Putative
           uncharacterized protein z410R - Chlorella virus ATCV-1
          Length = 129

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
 Frame = -2

Query: 581 CWFRSWCWFRSWCWIRSRSRKW-SCPXXXXXXXARNRLFWIW 459
           CW   W W R W W   RS  W  C           R  W W
Sbjct: 45  CWRGFWLWGRPWFWSWHRSWHWCGCWPRRGSWHWHRRWLWHW 86


>UniRef50_Q00YI7 Cluster: Chromosome 11 contig 1, DNA sequence; n=1;
           Ostreococcus tauri|Rep: Chromosome 11 contig 1, DNA
           sequence - Ostreococcus tauri
          Length = 1120

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = -2

Query: 578 WFRSWCW-FRSWCWIRSRSRKW 516
           W   WCW +  WCW   R R+W
Sbjct: 311 WCCHWCWSWPCWCWCSCRWRRW 332


>UniRef50_Q5UQ54 Cluster: Uncharacterized protein L712; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
           protein L712 - Mimivirus
          Length = 530

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 484 PGTGSSGFGPYVANGG-YSRLEGYEYAWSSKSDFE 383
           PGTG + FG Y+AN G + R+  Y    S+  DF+
Sbjct: 252 PGTGKTTFGSYIANKGIFDRIIIYNLVQSTNFDFK 286


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,911,089
Number of Sequences: 1657284
Number of extensions: 5198230
Number of successful extensions: 17174
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17082
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)