Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0980
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 578  WFRSWCWFRSWCWIRSRSRKW 516
            +F+  C+F +W W R    K+
Sbjct: 1397 YFKIVCYFTNWAWYRKGLGKY 1417



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 581  CWFRSWCWFR 552
            C+F +W W+R
Sbjct: 1402 CYFTNWAWYR 1411



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 575  FRSWCWFRSWCWIRSRSRKW 516
            F+  C+F +W W R    K+
Sbjct: 1823 FKVVCYFTNWAWYRQGVGKY 1842



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 581  CWFRSWCWFR 552
            C+F +W W+R
Sbjct: 1827 CYFTNWAWYR 1836



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 581  CWFRSWCWFR 552
            C+F +W W+R
Sbjct: 2325 CYFTNWAWYR 2334



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 563  CWFRSWCWIRSRSRKW 516
            C+F +W W R    K+
Sbjct: 2325 CYFTNWAWYRQGDGKY 2340



 Score = 21.4 bits (43), Expect = 5.8
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +2

Query: 455  WSKSRRACSW 484
            W+K R+ C W
Sbjct: 1137 WNKERKICDW 1146


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 452 IWSKSRRACSWHQLQHQ 502
           +W K+RRA    QLQ Q
Sbjct: 173 VWFKNRRAKCRQQLQQQ 189


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 375 LPVSKSDFDDQAYS*PSSLLYPPFATYGPNP 467
           LP+S S      Y    + L PP     P+P
Sbjct: 210 LPISTSSLPSDFYRFSPTGLIPPHPGLSPHP 240


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 375 LPVSKSDFDDQAYS*PSSLLYPPFATYGPNP 467
           LP+S S      Y    + L PP     P+P
Sbjct: 102 LPISTSSLPSDFYRFSPTGLIPPHPGLSPHP 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,272
Number of Sequences: 336
Number of extensions: 1589
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)