Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0979
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7MZR7 Cluster: Similar to unknown protein of Photorhab...    38   0.18 
UniRef50_Q5CV19 Cluster: Putative uncharacterized protein; n=2; ...    36   1.3  
UniRef50_A5CFA8 Cluster: Primosomal protein N'; n=1; Orientia ts...    35   2.2  
UniRef50_A1SI84 Cluster: AMP-dependent synthetase and ligase; n=...    34   3.9  
UniRef50_Q5NYQ6 Cluster: Acetoacetate metabolism regulatory prot...    33   6.7  
UniRef50_UPI0000DB0EE5 Cluster: hypothetical protein RbelO_01000...    33   8.9  

>UniRef50_Q7MZR7 Cluster: Similar to unknown protein of Photorhabdus
           luminescens; n=2; Photorhabdus luminescens subsp.
           laumondii|Rep: Similar to unknown protein of
           Photorhabdus luminescens - Photorhabdus luminescens
           subsp. laumondii
          Length = 868

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 19/65 (29%), Positives = 35/65 (53%)
 Frame = +2

Query: 89  QKNNRICQTLQEDPYFEIDEVIGKPWRIYYTWNMRFEKKCMDMTFKNATPKIVQRDGTTC 268
           +K +RI +TL+E PY+E+     +P    Y W+ +    C D+T +    + +  DGT  
Sbjct: 201 RKVSRISRTLEEAPYYEVYHGALRPKSTLYPWSSK-RAGCADITVRAMQKRGLAADGTPV 259

Query: 269 TSILM 283
           + +L+
Sbjct: 260 SPVLI 264


>UniRef50_Q5CV19 Cluster: Putative uncharacterized protein; n=2;
            Cryptosporidium|Rep: Putative uncharacterized protein -
            Cryptosporidium parvum Iowa II
          Length = 1429

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = -2

Query: 466  TSFS*NLRRGTVCRFTVILPSRATLGTPEKLLRVLGRQKVASRAAPCPY*DVRWRHSSSA 287
            + F   +R+G +   + I  +    G P K+  VLG  +V S +AP    +  W H+++ 
Sbjct: 999  SGFDVEIRKGMITALSAIYTNFGDSGPPPKVRTVLGSNQVGSGSAPITDRNTPWGHANAN 1058

Query: 286  GHQDT 272
            G   T
Sbjct: 1059 GDVST 1063


>UniRef50_A5CFA8 Cluster: Primosomal protein N'; n=1; Orientia
           tsutsugamushi Boryong|Rep: Primosomal protein N' -
           Orientia tsutsugamushi (strain Boryong) (Rickettsia
           tsutsugamushi)
          Length = 646

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -1

Query: 326 PILRCKVAAFQFGWSSRYSCMSFHLSERF*ASHF*TSCPYTFFRTSCSTCNRSSMAS 156
           PI+ C+   F+F  SS  SC+ FH S+     H   S  +  F  SC  CN  ++++
Sbjct: 353 PIILCRNCGFRFMCSSCSSCLVFHKSKNKLQCHHCGS--FKPFAQSCPECNEQTLSA 407


>UniRef50_A1SI84 Cluster: AMP-dependent synthetase and ligase; n=8;
           Actinomycetales|Rep: AMP-dependent synthetase and ligase
           - Nocardioides sp. (strain BAA-499 / JS614)
          Length = 521

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = +3

Query: 363 RTRSSFSGVPNVARDGSITVNRHTVPLLKFQLKLV----HGSKFLVMTDCHMGSRHYQPE 530
           RTR  +  +   A + +I + R   P L  +L +     +  + L  ++  +     QPE
Sbjct: 324 RTREEWDDLS--AEERAIRLTRAGAPALGVRLAISDHEENSGEVLARSNVVLDGYWQQPE 381

Query: 531 LTNHRIVQNWTRSPQNFALGDGFYTCLDDRNKDELV 638
            T   +   W  +    +LGD  Y  + DR KD ++
Sbjct: 382 ETERALADGWFHTGDGGSLGDDGYLTISDRKKDVII 417


>UniRef50_Q5NYQ6 Cluster: Acetoacetate metabolism regulatory protein
           atoC; n=3; Betaproteobacteria|Rep: Acetoacetate
           metabolism regulatory protein atoC - Azoarcus sp.
           (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
          Length = 446

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = -2

Query: 394 LGTPEKLLRVLGRQKVASRAAPCPY*DVRWRHSSSAGHQDTRACRSISLNDFRRRIFKR- 218
           L    KLLRVL   ++       P   V + H   A H D RA   +    FR  ++ R 
Sbjct: 245 LSMQAKLLRVLQEHRLQRLGGEAPL-AVEF-HLVCATHCDLRAM--VDEGRFRDDLYYRI 300

Query: 217 HVHTLFFEPHVPRVIDPPWLPYHFID 140
           HV  L   P   R  D PW  +HF+D
Sbjct: 301 HVIHLRIPPLRERREDIPWFVHHFVD 326


>UniRef50_UPI0000DB0EE5 Cluster: hypothetical protein
           RbelO_01000697; n=1; Rickettsia bellii OSU 85-389|Rep:
           hypothetical protein RbelO_01000697 - Rickettsia bellii
           OSU 85-389
          Length = 646

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 17/63 (26%), Positives = 38/63 (60%)
 Frame = +3

Query: 411 SITVNRHTVPLLKFQLKLVHGSKFLVMTDCHMGSRHYQPELTNHRIVQNWTRSPQNFALG 590
           +I+VN+ +   +   LK++H +K  ++ D H+ ++    ++T++ I Q + +S QN  + 
Sbjct: 105 AISVNKTSYKTINELLKIIHLAKIQILNDLHIEAKATLKKITDY-ITQKYEKS-QNCEII 162

Query: 591 DGF 599
           +GF
Sbjct: 163 EGF 165


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,961,209
Number of Sequences: 1657284
Number of extensions: 16741025
Number of successful extensions: 43531
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 41846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43519
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)