Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0976
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    24   1.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   5.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   5.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.7  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +3

Query: 57  FVHLSKQKQTQDKMCDRKAVIKNADMSEEMQQD--AVDCATQALEKFNIEKDIA-AFIKK 227
           F+ + KQK  +D   D+KA+ K     E+ ++D  +V   T  +E    + D +    + 
Sbjct: 68  FIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRA 127

Query: 228 EFDKKYN 248
           +F++  N
Sbjct: 128 KFEELNN 134


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 277 ITTHDAMPVGLYFLSNSFLMN 215
           IT H++ P  L+FL+N FL N
Sbjct: 234 ITEHESKPNWLFFLAN-FLTN 253


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 523 ERFSSECESGCTVFTYTVYLIGNSQC 600
           ERFS E +   T +TY  +  G   C
Sbjct: 412 ERFSDENKKNLTPYTYLPFGEGPRNC 437


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 636 PGACGVCLYCVSYN 677
           P  C +  YC++YN
Sbjct: 431 PDDCSIFYYCLAYN 444



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 576 LFNRKFTMLDINCVLPLHLVPGACGV 653
           L N KFT+ DI+  L  HL+    G+
Sbjct: 34  LNNGKFTVEDIDPTLCTHLIYSFVGL 59


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 582 NRKFTMLDINCVLPLHLVPGACGV 653
           N KFT LD++  L  HL+    G+
Sbjct: 37  NGKFTALDVDPTLCTHLLYAFVGL 60


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 260 CIVGRNFGSYVTHETRHFIYFYLGQ 334
           C+ G     + TH T H  Y Y G+
Sbjct: 70  CLNGATCQDHTTHYTCHCPYGYTGK 94


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 618 LPLHLVPGACGVCL 659
           LP HLV G C V L
Sbjct: 341 LPAHLVAGTCFVQL 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,708
Number of Sequences: 336
Number of extensions: 3541
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)