Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0975
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    30   0.061
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.43 
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    27   0.57 
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   4.0  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   5.3  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 30.3 bits (65), Expect = 0.061
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +2

Query: 452 RGGGFENANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQ 631
           +GG  E A +R +R     +   RE+ +QQQ+ + +  Q QQ+ ++ ++Q    +   +Q
Sbjct: 165 QGGNRETARKRQQR----LRRRERERQQQQQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQ 220

Query: 632 VSDQIQIE 655
              Q Q++
Sbjct: 221 QPQQQQLQ 228



 Score = 29.1 bits (62), Expect = 0.14
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = +2

Query: 470 NANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSDQIQ 649
           NA  +   G GGN+ T R++ ++ +    +  Q QQ+ ++ ++Q    +   +Q   Q Q
Sbjct: 156 NATLQQSSGQGGNRETARKRQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQRQQQQQCQ 215



 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = +2

Query: 467 ENANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSDQI 646
           +   Q+ ER +       R++ + QQ+ + +  Q QQ+  + +RQ    +   +Q   Q 
Sbjct: 288 QQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQR 347

Query: 647 Q 649
           Q
Sbjct: 348 Q 348


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 469 KRKSEN*KRNWRK-QNDSEREK*TTTRIQIEVSTSTARSRRIEKTI 603
           K+KSE  ++NW+K + D E  K     +Q  + T+  ++ ++E+ I
Sbjct: 800 KKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQI 845


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +2

Query: 464 FENANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQ 601
           F    +R  RGI   K + +++ +QQ+  + +  Q QQ+ ++ + Q
Sbjct: 164 FVEVVRRKPRGINSGKSSSQQREQQQRSLQQQQQQQQQQQQQQQEQ 209



 Score = 23.0 bits (47), Expect = 9.2
 Identities = 14/63 (22%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 437 EIYRKRGGGF---ENANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQLD 607
           E+ R++  G    ++++Q+ E+     +   +++ +QQQ+ + +  Q QQ+ +  + + D
Sbjct: 166 EVVRRKPRGINSGKSSSQQREQQQRSLQQQQQQQQQQQQQQQEQQQQQQQQRKIRRPKAD 225

Query: 608 VIE 616
           +IE
Sbjct: 226 LIE 228


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/48 (22%), Positives = 26/48 (54%)
 Frame = +2

Query: 458 GGFENANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQ 601
           G   + N+R  +G    +   +++  QQ+E + +  Q QQ+ ++ ++Q
Sbjct: 204 GAHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQ 251


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +2

Query: 455  GGGFENANQRIERGIGGNKMTLREKNEQQQEYRLK 559
            GGG     ++  RG GG+  +  E+ E  ++ + K
Sbjct: 951  GGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKK 985


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,238
Number of Sequences: 2352
Number of extensions: 10916
Number of successful extensions: 68
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)