Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0975
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 32 0.42
At5g16790.1 68418.m01966 expressed protein 32 0.42
At3g22790.1 68416.m02873 kinase interacting family protein simil... 32 0.42
At3g02950.1 68416.m00290 expressed protein 31 0.73
At2g18630.1 68415.m02169 expressed protein unusual splice site a... 30 1.7
At1g66840.1 68414.m07597 expressed protein contains Pfam profile... 30 1.7
At2g19410.1 68415.m02264 protein kinase family protein contains ... 29 3.0
At1g29570.1 68414.m03616 zinc finger protein-related contains si... 29 3.9
At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger) fa... 28 5.2
At1g28420.1 68414.m03494 homeobox transcription factor, putative... 28 5.2
At4g25350.1 68417.m03648 EXS family protein / ERD1/XPR1/SYG1 fam... 28 6.8
At1g77920.1 68414.m09080 bZIP family transcription factor contai... 28 6.8
At1g69280.1 68414.m07943 expressed protein 28 6.8
At3g58150.1 68416.m06484 expressed protein similar to SP|Q9H6K4 ... 27 9.0
At2g35330.1 68415.m04332 zinc finger (C3HC4-type RING finger) pr... 27 9.0
At2g22900.1 68415.m02718 galactosyl transferase GMA12/MNN10 fami... 27 9.0
At1g77370.1 68414.m09010 glutaredoxin, putative similar to gluta... 27 9.0
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 1060
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/81 (23%), Positives = 38/81 (46%)
Frame = +2
Query: 362 DEVERFGIETQRNMS*RNSWT*RISEIYRKRGGGFENANQRIERGIGGNKMTLREKNEQQ 541
D+ ER+ +E Q+ N+ ++ +IYR+R + N + T+ K E+
Sbjct: 512 DDSERYKLEYQKRYDESNNDKKKLEDIYRERITKLQGENSSLNERCSTLVKTVESKKEEI 571
Query: 542 QEYRLKYLQAQQEVEELKRQL 604
+E+ Y Q + + ++ QL
Sbjct: 572 KEWIRNYDQIVLKQKAVQEQL 592
>At5g16790.1 68418.m01966 expressed protein
Length = 233
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Frame = +2
Query: 518 LREK---NEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQ 631
LREK NE + E + +QAQ ++E+LK+QL+ + + +Q
Sbjct: 101 LREKENFNELKDETNRQIMQAQADIEDLKKQLEESKIERQQ 141
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 31.9 bits (69), Expect = 0.42
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +2
Query: 464 FENANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSDQ 643
F N + + E I + L + NE + RL+Y Q + + +L+R++ + + K++S +
Sbjct: 319 FSNQSAKAEDEIKALRHELVKVNEVKDGLRLRYQQCLETISKLEREVSHAQDNAKRLSSE 378
Query: 644 IQIEIXKVK 670
+ K+K
Sbjct: 379 VLAGAAKLK 387
>At3g02950.1 68416.m00290 expressed protein
Length = 236
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +2
Query: 518 LREK---NEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNK 628
LREK NE + E + +QA+ E+E+LK+QL+ + D +
Sbjct: 102 LREKESFNEVKDETERQIMQAKAEIEDLKKQLEESKIDRQ 141
>At2g18630.1 68415.m02169 expressed protein unusual splice site at
second intron; GA instead of conserved GT at donor site;
similar to At14a GI:11994571 and GI:11994573
[Arabidopsis thaliana]
Length = 393
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 55 EITGGSILLQKQLGDMEGEVKEIQMEIAAIKRDRLDV-MTKKQMNVFTPESEYLESTDSG 231
E+ SIL++K ++E +K+ + I K RL + KK+++VFT E L
Sbjct: 300 EMDNISILVRKVEVEIESLLKKAEFAITEEKEVRLAIDEIKKKLDVFTETIEELGEHAGK 359
Query: 232 FGESVNKAR 258
+ V KAR
Sbjct: 360 YCSDVTKAR 368
>At1g66840.1 68414.m07597 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 607
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/59 (22%), Positives = 36/59 (61%)
Frame = +1
Query: 52 VEITGGSILLQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDS 228
++ GG + + ++L DM+ E+ ++++++ + R+++ V K+ M + + E L+ +S
Sbjct: 101 IDGNGGYVRIMRELEDMKQELSKLKLDVVYVSREKV-VAEKEVMELESRMEENLKLLES 158
>At2g19410.1 68415.m02264 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 801
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 524 EKNEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSDQIQIEIXKVKM 673
+++ + + K ++ ++EVE LK +L F KQ +++ KVKM
Sbjct: 296 DRSPPETSRKSKKVEIEEEVERLKNELQSTVFKYKQACEELFSTQNKVKM 345
>At1g29570.1 68414.m03616 zinc finger protein-related contains
similarity to zinc finger proteins (CCCH type)
Length = 321
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 428 RISEIYRKRGGGFENANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEE---LKR 598
R+ I R+R EN ++ +R + E+N Q+Q R + ++E +E +R
Sbjct: 172 RMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQR 231
Query: 599 QLDVIEFDNKQVSDQIQ 649
Q D IE ++ + +Q
Sbjct: 232 QRDSIERQRREAQENLQ 248
>At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 624
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +1
Query: 442 IPKKRWRL*KRKSEN*KRNWRKQNDSEREK*TTTRIQIEVSTSTARSRRIEKTIGCYRI 618
+ + WR + + + +R WRK E+ I +E +T + RRI C+ +
Sbjct: 516 LASRSWRRYRTFTVHHRRRWRKTTAEEKHSSPYCTICLENATEGEKMRRIAACSHCFHV 574
>At1g28420.1 68414.m03494 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7 GI:19486
[Lycopersicon peruvianum]
Length = 1703
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 518 LREKNEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSDQIQIE 655
L+ + ++ E R K+LQ + E E K+Q D I + + ++ IE
Sbjct: 426 LQREQRREVERREKFLQRENERAEKKKQKDEIRREKDAIRRKLAIE 471
>At4g25350.1 68417.m03648 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 745
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 521 REKNEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSDQIQ 649
RE N+ YRLK A+ E L +Q+D + +V DQ Q
Sbjct: 111 REFNKVNNFYRLKVETARTEALALNKQMDALIAFRHKVMDQNQ 153
>At1g77920.1 68414.m09080 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 368
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +2
Query: 509 KMTLREKN--EQQQEYRLKYLQAQQEVEELKRQ 601
K LR+K +Q +E RLK Q +QE+E++K+Q
Sbjct: 107 KSRLRKKAYVQQLEESRLKLSQLEQELEKVKQQ 139
>At1g69280.1 68414.m07943 expressed protein
Length = 400
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 603 NCLFNSSTSCCACRYFNLYSCCC 535
+C +NSS C +++ +SCCC
Sbjct: 343 SCDYNSSCGWLFCCHWSCWSCCC 365
>At3g58150.1 68416.m06484 expressed protein similar to SP|Q9H6K4
Optic atrophy 3 protein {Homo sapiens}
Length = 183
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/54 (20%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 485 IERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQLDVIEFD-NKQVSDQ 643
++R G ++ ++ E+R K+ + + E+EE+K++ ++ + +K +++Q
Sbjct: 98 VQRNARGEAKKEEKRQQELAEFRRKHEKMENEIEEMKQRCCLLHEELSKPINEQ 151
>At2g35330.1 68415.m04332 zinc finger (C3HC4-type RING finger)
protein-related contains weak hit to Pfam profile:
PF00097 zinc finger, C3HC4 type (RING finger); weak
similarity to RING finger protein 8 (Swiss-Prot:O76064)
[Homo sapiens]
Length = 738
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Frame = +2
Query: 518 LREKNEQQQEYRLKYLQAQQ-------EVEELKRQLDVIEFDNKQVSDQIQIEI 658
L + ++++EY K+ Q Q+ +VEE +R + IE NK+ + ++++I
Sbjct: 556 LAQITQEEKEYEAKWRQEQKAKEQVLAQVEEEQRSKEAIEASNKRKVESLRLKI 609
>At2g22900.1 68415.m02718 galactosyl transferase GMA12/MNN10 family
protein very low similarity to
alpha-1,2-galactosyltransferase, Schizosaccharomyces
pombe [SP|Q09174]
Length = 449
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 224 SVLSRYSDSGVKTFICFF-VITSNRSRFIAAISIWISFTSPSISPN 90
S +++Y+ + + +C V+ F++ I +W F+ SISPN
Sbjct: 14 SPMAKYAGTRTRPVVCISDVVLFLGGAFMSLILVWSFFSFSSISPN 59
>At1g77370.1 68414.m09010 glutaredoxin, putative similar to
glutaredoxin [Ricinus communis] gi|1732424|emb|CAA89699
Length = 130
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 458 GGFENANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVS 637
G + + ++ I NK+ + K+ Y L++++ +LK + V+E D ++
Sbjct: 28 GAANSVSAFVQNAILSNKIVIFSKS-----YCPYCLRSKRIFSQLKEEPFVVELDQREDG 82
Query: 638 DQIQIEI 658
DQIQ E+
Sbjct: 83 DQIQYEL 89
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,163,871
Number of Sequences: 28952
Number of extensions: 247023
Number of successful extensions: 880
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -