Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0974
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   7.0  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.2  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.2  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   9.2  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 85   CPKNTEHRA-RHAGKCACCPACVTLLGEGA 171
            C +  E++  RH G C  CPAC  L+ + A
Sbjct: 1016 CDRCKENKYDRHQG-CLDCPACYNLVQDAA 1044


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -1

Query: 695 IVATNLKNNLLITNSW--PNCNIFYIKFGECDF 603
           ++  NLKN ++ TN W     N + +K+   D+
Sbjct: 60  LIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDY 92


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 695 IVATNLKNNLLITNSW 648
           ++  NLKN ++ TN W
Sbjct: 64  LIDVNLKNQIMTTNLW 79


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 695 IVATNLKNNLLITNSW 648
           ++  NLKN ++ TN W
Sbjct: 64  LIDVNLKNQIMTTNLW 79


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 695 IVATNLKNNLLITNSW 648
           ++  NLKN ++ TN W
Sbjct: 60  LIDVNLKNQIMTTNLW 75


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,254
Number of Sequences: 2352
Number of extensions: 16494
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)