Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0970
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   4.0  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   4.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.1  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 270 IEYGANGSKSGKTNSRMSTLLFWQGKGKGN 359
           I+YG   S  G T   +  LL +Q +GK N
Sbjct: 369 IDYGTLYSLFGSTAMNVIILLQFQKQGKYN 398


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 336 WQGKGKGNGAPNGRNW 383
           WQ  G+  G    RNW
Sbjct: 116 WQDSGESPGFTTERNW 131


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 391 AWIQLRPFGAPFPLPLPCQKSR 326
           AW    P   P P  LP  KSR
Sbjct: 65  AWQANSPPSPPAPSELPALKSR 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,805
Number of Sequences: 336
Number of extensions: 1437
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)