Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0970
         (449 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27365| Best HMM Match : PID (HMM E-Value=1.90001e-40)               44   4e-05
SB_9817| Best HMM Match : PID (HMM E-Value=1.2e-20)                    44   4e-05
SB_23484| Best HMM Match : COesterase (HMM E-Value=0)                  28   4.1  
SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)                    28   4.1  
SB_53446| Best HMM Match : Neur_chan_memb (HMM E-Value=0.038)          27   5.4  
SB_27756| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.4  
SB_42717| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  
SB_33345| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  
SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  

>SB_27365| Best HMM Match : PID (HMM E-Value=1.90001e-40)
          Length = 837

 Score = 44.4 bits (100), Expect = 4e-05
 Identities = 22/44 (50%), Positives = 27/44 (61%)
 Frame = +3

Query: 318 MSTLLFWQGKGKGNGAPNGRNWIHAPDSLVKGHVAYLVKFLGCT 449
           MST+L W  K KG     G+ W+HAP+SL +  V Y VKF G T
Sbjct: 1   MSTVLKWASK-KGK-QQEGKQWLHAPESLTQAAVLYTVKFYGVT 42


>SB_9817| Best HMM Match : PID (HMM E-Value=1.2e-20)
          Length = 144

 Score = 44.4 bits (100), Expect = 4e-05
 Identities = 22/44 (50%), Positives = 27/44 (61%)
 Frame = +3

Query: 318 MSTLLFWQGKGKGNGAPNGRNWIHAPDSLVKGHVAYLVKFLGCT 449
           MST+L W  K KG     G+ W+HAP+SL +  V Y VKF G T
Sbjct: 1   MSTVLKWASK-KGK-QQEGKQWLHAPESLTQAAVLYTVKFYGVT 42


>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
          Length = 586

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 9   YHHH*NNINNSWPSLVQRR 65
           Y H+  +INN+WP+  ++R
Sbjct: 94  YRHYGGSINNAWPTFTEKR 112


>SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)
          Length = 1348

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 381  WIHAPDSLVKGHVAYLVKFLG 443
            W H P+ L+KG V Y  ++LG
Sbjct: 1307 WHHEPEVLLKGSVNYTTQYLG 1327


>SB_53446| Best HMM Match : Neur_chan_memb (HMM E-Value=0.038)
          Length = 406

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -2

Query: 397 SGAWIQLRPFGAPFPLPLPCQKSRVDILELVLPLFDPFAPYSISLPKYCLPMEHH 233
           +G   + R FG    LPL    ++ +  EL LP  +   PYS+    +CL   HH
Sbjct: 118 TGIAARQRRFGIRVFLPLGGLPTKAN--ELHLPRREYTVPYSVPSITFCLKQVHH 170


>SB_27756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 520

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -2

Query: 376 RPFGAPFPLPLPCQKSRVDILELVLPLFDPFAPYSISLPKYCLPMEHHRPP 224
           +PF   F      Q S+V  L  V+ L+DP + +      Y  P + ++PP
Sbjct: 379 KPFSNKFSQSTRDQLSKVSGLGCVIFLYDPESQFRPPFKSYQPPYKSYQPP 429


>SB_42717| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 407

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 282 RHIQSHCLNTVYQWNITVR 226
           RH +S C  T+Y W I +R
Sbjct: 373 RHTESFCEQTMYGWQIEIR 391


>SB_33345| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 728

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 264 SEIEYGANGSKSGKTNS 314
           SE+ YG+ G K GK+N+
Sbjct: 474 SEVRYGSKGDKDGKSNN 490


>SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2630

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 299  AFRSVRA--IFNLTA*ILFTNGTSPSAIIMIEDEE 201
            A R ++A  ++++T     T GT P+A IMI  EE
Sbjct: 1786 ALRGLKAFTVYDITLVAFTTKGTGPAARIMIRTEE 1820


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,621,153
Number of Sequences: 59808
Number of extensions: 210095
Number of successful extensions: 569
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)