BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0970
(449 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 26 0.53
AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein. 25 0.93
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 25 1.6
CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase ... 23 3.8
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 22 8.7
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 22 8.7
AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical prote... 22 8.7
AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical prote... 22 8.7
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 22 8.7
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 26.2 bits (55), Expect = 0.53
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 409 LTSESGAWIQLRPFGAPFPLPLP 341
+ E G +I L+P+ P P P+P
Sbjct: 171 IVMEGGTYIDLQPYRPPKPAPVP 193
>AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.93
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 442 PRNLTR*ATWPLTSESGAWIQLR-PFGAPFPLPLPCQKSRVDILELVL 302
P + + ATW T ES AW Q +P LP K R++ ++L
Sbjct: 283 PDHFEQIATWLSTLESEAWNQANFERLLLYPNRLPLAKQRLEAFRMML 330
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 24.6 bits (51), Expect = 1.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 373 PFGAPFPLPLPCQKSRVDILELVLP 299
P P PLP+P +D L+ LP
Sbjct: 633 PIIIPLPLPIPVPIPVIDFLKAALP 657
>CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase
protein.
Length = 562
Score = 23.4 bits (48), Expect = 3.8
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 327 LLFWQGKGKGNGAPNGRNWIHAPDSLV 407
++ W G G +G +WI+ PD+L+
Sbjct: 116 VMVWIHGGSFTGG-SGNSWIYGPDNLM 141
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 22.2 bits (45), Expect = 8.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 64 GRXRRPLCSNLKN 102
G+ R PLC+ L+N
Sbjct: 88 GKPREPLCTRLRN 100
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 22.2 bits (45), Expect = 8.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 64 GRXRRPLCSNLKN 102
G+ R PLC+ L+N
Sbjct: 88 GKPREPLCTRLRN 100
>AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 22.2 bits (45), Expect = 8.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 402 ASPERGSSCGRS 367
A PERG CGR+
Sbjct: 173 APPERGHRCGRT 184
>AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 22.2 bits (45), Expect = 8.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 402 ASPERGSSCGRS 367
A PERG CGR+
Sbjct: 173 APPERGHRCGRT 184
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 22.2 bits (45), Expect = 8.7
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
Frame = -3
Query: 57 ALRMASYY*YYFN---DDDT 7
A R YY YY+N DDDT
Sbjct: 195 ARRQNCYYYYYYNEEEDDDT 214
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,125
Number of Sequences: 2352
Number of extensions: 6962
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -