Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0967
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.45 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.4  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   1.8  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.4  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   7.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 458 YLYNTYYFISFLFGLLKIHIF*FQISIFTTVHII 357
           +L   YYF+  LF LL I+ F     IF TVH++
Sbjct: 129 FLLCIYYFVVPLFFLLCIYYFYCAFIIF-TVHLL 161



 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 458 YLYNTYYFISFLFGLLKIHIF*FQISIFTTVHII 357
           +L  TYYF      LL ++ F +   IF TVH++
Sbjct: 96  FLLCTYYFYYAFIILLCVYYFYYAFIIF-TVHLL 128


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 154 KLHKRDNKHTFQRVWRDAQCS*GKQVVAVCMDFF 53
           KLHK DNK     +W+  + +   Q+   C  FF
Sbjct: 110 KLHKLDNKLKHMLIWKSYKRT---QIFITCELFF 140


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +1

Query: 52  EKNPCIQPPLVCPKNTEHRARHAGKCACCPAC 147
           E+ PCI     C KNT  R    G C    +C
Sbjct: 86  EREPCIAGSAPCRKNT-GRCAFDGICCSQDSC 116


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 697 IVATNLKNNLLITNSWPKL 641
           I+  + KN LLITN W  L
Sbjct: 40  IIDVDEKNQLLITNIWLSL 58


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 697 IVATNLKNNLLITNSWPKL 641
           I+  + KN LLITN W  L
Sbjct: 40  IIDVDEKNQLLITNIWLSL 58


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 187 NKSCKLHLHQVKLHKRDNK 131
           NK C LH H  KL K  N+
Sbjct: 503 NKICALHHHLSKLVKLFNE 521


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 187 NKSCKLHLHQVKLHKRDNK 131
           NK C LH H  KL K  N+
Sbjct: 228 NKICALHHHLSKLVKLFNE 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,457
Number of Sequences: 336
Number of extensions: 3938
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)