Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0967
(698 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.69
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.69
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.69
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 24 1.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 2.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 2.8
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.7
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 4.9
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 6.4
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 8.5
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 8.5
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 697 IVATNLKNNLLITNSWPKL*YLLYQI 620
I+ + KN +L TN+W KL ++ Y +
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNL 48
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 697 IVATNLKNNLLITNSWPKL*YLLYQI 620
I+ + KN +L TN+W KL ++ Y +
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNL 48
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 697 IVATNLKNNLLITNSWPKL*YLLYQI 620
I+ + KN +L TN+W KL ++ Y +
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNL 48
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 697 IVATNLKNNLLITNSWPKL*YLLYQI 620
I+ + KN +L TN+W KL ++ Y +
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNL 48
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 697 IVATNLKNNLLITNSWPKL*YLLYQI 620
I+ + KN +L TN+W KL ++ Y +
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNL 48
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 697 IVATNLKNNLLITNSWPKL*YLLYQI 620
I+ + KN +L TN+W KL ++ Y +
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNL 48
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 697 IVATNLKNNLLITNSWPKL*YLLYQI 620
I+ + KN +L TN+W KL ++ Y +
Sbjct: 91 IIDVDEKNQILTTNAWLKLEWVDYNL 116
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 697 IVATNLKNNLLITNSWPKL*YLLYQI 620
I+ + KN +L TN+W KL ++ Y +
Sbjct: 91 IIDVDEKNQILTTNAWLKLEWVDYNL 116
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.0 bits (52), Expect = 0.69
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 697 IVATNLKNNLLITNSWPKL 641
I+ + KN LLITN W KL
Sbjct: 60 IIDVDEKNQLLITNLWLKL 78
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 283 QENISLQYFYHDL-FEI*FVYGIKLIIICTV 372
++N+ + Y D + I F Y I LI++CTV
Sbjct: 802 EDNLLVCNSYVDASYMIAFAYPIMLIVVCTV 832
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 584 NKSFLINLSNPSLQICHNY*RLMRIYNYTRRVTYIVPI 471
+ ++ N +N C+NY +L NY ++ VPI
Sbjct: 86 SNNYNYNNNNYKKLYCNNYKKLYYNINYIEQIPIPVPI 123
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 584 NKSFLINLSNPSLQICHNY*RLMRIYNYTRRVTYIVPI 471
+ ++ N +N C+NY +L NY ++ VPI
Sbjct: 86 SNNYNYNNNNYKKLYCNNYKKLYYNINYIEQIPIPVPI 123
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 584 NKSFLINLSNPSLQICHNY*RLMRIYNYTRRVTYIVPI 471
+ ++ N +N C+NY +L NY ++ VPI
Sbjct: 86 SNNYNYNNNNYKKLYCNNYRKLYYNINYIEQIPIPVPI 123
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 697 IVATNLKNNLLITNSW 650
++ NLKN ++ TN W
Sbjct: 65 LIDVNLKNQIMTTNLW 80
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 697 IVATNLKNNLLITNSW 650
++ NLKN ++ TN W
Sbjct: 65 LIDVNLKNQIMTTNLW 80
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 2.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 697 IVATNLKNNLLITNSW 650
++ NLKN ++ TN W
Sbjct: 61 LIDVNLKNQIMTTNLW 76
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.0 bits (47), Expect = 2.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 697 IVATNLKNNLLITNSW 650
++ NLKN ++ TN W
Sbjct: 57 LIDVNLKNQIMTTNVW 72
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.6 bits (46), Expect = 3.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 697 IVATNLKNNLLITNSW 650
++ NLKN ++ TN W
Sbjct: 70 LIEMNLKNQVMTTNVW 85
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 169 HLHQVKLHKRDNKHTFQRVWRDAQ 98
++ +VK K +KH Q W D +
Sbjct: 325 YIPKVKNKKAGSKHLLQNTWLDPE 348
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.8 bits (44), Expect = 6.4
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +1
Query: 88 PKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETPSAV 219
P N A A KCA L E A C+ K + +P V
Sbjct: 153 PMNRNRPAYLASKCALTTLTDCLRSELAQCESNIKVISISPDLV 196
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +1
Query: 106 RARHAGKCACCPACVTLLGEGAT 174
+ RH CC C L G G++
Sbjct: 3 KGRHVVMSCCCWCCDNLGGPGSS 25
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 697 IVATNLKNNLLITNSW 650
++ NLK+ +L TN W
Sbjct: 57 LIDLNLKDQILTTNVW 72
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,151
Number of Sequences: 438
Number of extensions: 4625
Number of successful extensions: 33
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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