Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0965
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 98 4e-21
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 93 2e-19
11_01_0617 - 4939108-4939259,4939584-4940259 31 0.92
11_06_0092 + 19973364-19975983,19976272-19976648 29 3.7
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 29 3.7
02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 29 3.7
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 29 3.7
02_01_0299 + 2001938-2002510,2002821-2003033,2003129-2003333,200... 28 4.9
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 28 6.5
07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201... 28 6.5
12_01_0623 - 5131825-5131953,5133358-5133540,5133961-5134257 27 8.6
11_06_0690 + 26303733-26306540 27 8.6
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 27 8.6
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 27 8.6
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 27 8.6
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 98.3 bits (234), Expect = 4e-21
Identities = 56/114 (49%), Positives = 66/114 (57%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINXADSVHLHPQGYQR 435
QVYEET+G+ V DPVLRT KPLSVELGPGILG+IFDGIQRPLK I P+G
Sbjct: 104 QVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSV 163
Query: 436 AFPXXXXXXXI*PIKX*GRVPHHR*DLYGIVHENTLVKHRMLVPXKAKGTVTYI 597
P K DLY V ENTL+KH + +P + G ++YI
Sbjct: 164 PALDKDQLWDFEPKKLGVGDAITGGDLYATVFENTLMKHHVALPPGSMGKISYI 217
Score = 87.0 bits (206), Expect = 1e-17
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Frame = +2
Query: 113 RFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIXLEGDMXTTRY---TKKLQV* 283
R G V AVSGPVV A+ M G+AMYELVRVG + L+GEII LEGD T + T L V
Sbjct: 56 RIGGVLAVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSATIQVYEETAGLMVN 115
Query: 284 L*VIQYSVLESLCQ*NLVPVSWVPSLTVFSVPSRTSTXLTQSIYIPKGINVPSLAREVDW 463
V++ S+ L P P +T + +YIP+G++VP+L ++ W
Sbjct: 116 DPVLRTRKPLSV---ELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSVPALDKDQLW 172
Query: 464 EFNPLXVKVGSHIT-GEICMVLYTRTL 541
+F P + VG IT G++ ++ TL
Sbjct: 173 DFEPKKLGVGDAITGGDLYATVFENTL 199
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 93.1 bits (221), Expect = 2e-19
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Frame = +2
Query: 62 MASKGGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIXLEG 241
MA + T + E E +GYV VSGPVV A+ M G+AMYELVRVG++ L+GEII LEG
Sbjct: 1 MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG 60
Query: 242 DMXTTRYTKKLQV*L*VIQYSVLESLCQ*NLVPVSWVPSL--TVF---SVPSRTSTXLTQ 406
D T + ++ + + + V P + +F P +T +
Sbjct: 61 DSATIQVYEETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTIAIKSG 120
Query: 407 SIYIPKGINVPSLAREVDWEFNPLXVKVGSHITG 508
+YIP+G++VP+L ++ W F P + VG ITG
Sbjct: 121 DVYIPRGVSVPALDKDALWHFKPEKLGVGDIITG 154
Score = 93.1 bits (221), Expect = 2e-19
Identities = 57/119 (47%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGK-----PLSVELGPGILGSIFDGIQRPLKDINXADSVHLHP 420
QVYEET+G+ V DPVLRT K PLSVELGPGILG+IFDGIQRPLK I P
Sbjct: 66 QVYEETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIP 125
Query: 421 QGYQRAFPXXXXXXXI*PIKX*GRVPHHR*DLYGIVHENTLVKHRMLVPXKAKGTVTYI 597
+G P K DLY IV+ENTL++H++ +P A G ++YI
Sbjct: 126 RGVSVPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGKISYI 184
>11_01_0617 - 4939108-4939259,4939584-4940259
Length = 275
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 80 LRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEII 229
L +A EE+EER G F V+ + +A+++ VR+G LVG ++
Sbjct: 116 LLDMAMEEDEERGGARFRVADVLEKQNGRRETALHDAVRLGDERLVGHLM 165
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 259 VYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 381
V E +G+ D RTG L + PG+ G + D + R L
Sbjct: 894 VLETVTGMRPADSTFRTGLSLRQYVEPGLHGRLMDVVDRKL 934
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 158 EKMSGSAMYELVRVGYNELVGEI 226
EKMS + EL+ +GYN+L G I
Sbjct: 469 EKMSNLSSLELIDLGYNQLTGAI 491
>02_05_1006 +
33448476-33448915,33449016-33449083,33449681-33449751,
33449905-33450156,33450473-33450636,33450731-33450773,
33451044-33451161,33451384-33451481,33451550-33451594
Length = 432
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 497 GTRP*XLMG*IPSQPPWPGKAR 432
G RP MG PS PP PG++R
Sbjct: 33 GRRPASAMGQAPSSPPGPGRSR 54
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 214 EFIVTDTDQLVHSRSGHLFGSDDGSRYGEDISEPLL 107
EF+V +T++L H + G D+ + ED+ EPLL
Sbjct: 115 EFMVRETEKL-HQQVGRYKSPDEHPFFPEDLPEPLL 149
>02_01_0299 +
2001938-2002510,2002821-2003033,2003129-2003333,
2003485-2003560,2003665-2003800,2003905-2004009,
2004095-2004172,2004264-2004353,2004441-2004506,
2004836-2004892,2004996-2005073,2005165-2005212,
2005330-2005401
Length = 598
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 59 KMASKGGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEII 229
K + G + T+A+ E EE+ G +F GP+ + G+ ++ VG +G I+
Sbjct: 124 KFSRLGQMSTVASPEQEEQEGVLFRGGGPMCDF-AVPGAQDTTVLVVGATSRIGRIV 179
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 306 YWKAFVSRTWSRYLGFHL*RYSASPQGHQXS*LSPSTSPRVSTCLPWP 449
+W V+R L R+ A P+ H LSP + P + PWP
Sbjct: 675 HWLGVVARDEEGPLVHDTSRWVAPPRTHAAVELSPPSPPHLRIPRPWP 722
>07_03_0537 -
19218461-19218982,19219482-19219868,19219993-19220154,
19220464-19221117,19221233-19221277,19223300-19223845,
19223930-19224307,19224642-19225313,19225373-19225456
Length = 1149
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Frame = +3
Query: 138 LDPSSLPKRC--PDLLCTS--WSVSVTM 209
+DP+S+PK C PD LC S W VS +
Sbjct: 856 VDPASIPKHCAAPDNLCFSRTWLVSFNL 883
>12_01_0623 - 5131825-5131953,5133358-5133540,5133961-5134257
Length = 202
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 307 TGKPLSVELGPGILGS--IFDGIQRPLKDINXADSVHLHPQGYQRAF 441
TG LGP ++ + ++DGI R K + A +H++ + +F
Sbjct: 44 TGNNRETGLGPLVVNNWPVYDGIGRDAKVVARAQGLHIYAGNWHNSF 90
>11_06_0690 + 26303733-26306540
Length = 935
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 127 DISEPLLILLIGDRPQTAFARHFELVILYPRRERWKRRTENG 2
D + PL + L+G RP+ + R + V+ Y R + +NG
Sbjct: 827 DFAAPLTMALLGRRPRPSRVRQRQQVVPYSPRRSNRLAAKNG 868
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = -1
Query: 268 LRIPGGGHVTFKXDNLTDEFIVTDTDQLVHSRSGHLFGSDDGSRYGEDISEPLLILLIGD 89
+R P G + D ++D+F + +VH R H F + S Y E + +L+
Sbjct: 70 VRDPNGNQIHDSRDKISDKF-----EFIVHRRGVHRFCFTNKSPYHETVDFDVLVSHFSY 124
Query: 88 RPQTAFARHF 59
Q A HF
Sbjct: 125 YDQHAKDEHF 134
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPL 381
QV+E TSG+ ++ TG+ L + +LG IF+G +P+
Sbjct: 111 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPI 153
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 74 GGLRTIANEENEERFGYVFAVSGPVV-TAEKMSGSA 178
GG RT E+ EE+ V V GP++ K SG A
Sbjct: 621 GGARTAEKEDYEEKLKEVEQVCGPIIKQVYKKSGDA 656
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,399,858
Number of Sequences: 37544
Number of extensions: 376159
Number of successful extensions: 936
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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