Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0964
         (648 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7MZR7 Cluster: Similar to unknown protein of Photorhab...    35   2.0  
UniRef50_A6PNV0 Cluster: Secretion protein HlyD family protein p...    33   4.5  
UniRef50_Q92205 Cluster: Transposase; n=8; Sclerotiniaceae|Rep: ...    33   7.9  

>UniRef50_Q7MZR7 Cluster: Similar to unknown protein of Photorhabdus
           luminescens; n=2; Photorhabdus luminescens subsp.
           laumondii|Rep: Similar to unknown protein of
           Photorhabdus luminescens - Photorhabdus luminescens
           subsp. laumondii
          Length = 868

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 18/65 (27%), Positives = 34/65 (52%)
 Frame = +1

Query: 88  QKNNRICQTLQEDPYFEIDEVIGKPWRIYYTWNMRFEKKCMDMTFKNATPKIVQRVGTTC 267
           +K +RI +TL+E PY+E+     +P    Y W+ +    C D+T +    + +   GT  
Sbjct: 201 RKVSRISRTLEEAPYYEVYHGALRPKSTLYPWSSK-RAGCADITVRAMQKRGLAADGTPV 259

Query: 268 TSILM 282
           + +L+
Sbjct: 260 SPVLI 264


>UniRef50_A6PNV0 Cluster: Secretion protein HlyD family protein
           precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
           Secretion protein HlyD family protein precursor -
           Victivallis vadensis ATCC BAA-548
          Length = 331

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +2

Query: 479 VSRNDRLPHGISSLSARADEPPYRSELDTVTAKLALGDGFYTCLDDRNKDELVS 640
           V   DR+  G   + AR D  PYRSEL+   AKLA  +   T   + N+ E ++
Sbjct: 60  VDEGDRIKTG--EVIARLDSAPYRSELELARAKLAEAEAELTKRRNGNRPEEIA 111


>UniRef50_Q92205 Cluster: Transposase; n=8; Sclerotiniaceae|Rep:
           Transposase - Botrytis cinerea (Noble rot fungus)
           (Botryotinia fuckeliana)
          Length = 532

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 258 SNSLNDFRRRIFKRHVHTLFFEPHVPRVIDPP 163
           S+    F    FK ++H LF  PH   V+ PP
Sbjct: 279 SHETTQFMLECFKNNIHLLFLPPHTSHVLQPP 310


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,899,288
Number of Sequences: 1657284
Number of extensions: 15657239
Number of successful extensions: 43005
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 41305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42998
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)