Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0961
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    28   0.076
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    28   0.076
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.94 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   0.94 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   2.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   3.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   6.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.7  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 27.9 bits (59), Expect = 0.076
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +3

Query: 54  AEWRPLNSVLSFVPAVLNHRVVNPYKVFRDLQTQYFYMGNICIYN--FFCTVKICYNGI 224
           A+W  LN+ L ++  VL +R  +   + R++  Q+F    + I    F   V IC  G+
Sbjct: 105 AKWIRLNNNLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYILATVFLAYVWICEMGV 163


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 27.9 bits (59), Expect = 0.076
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +3

Query: 54  AEWRPLNSVLSFVPAVLNHRVVNPYKVFRDLQTQYFYMGNICIYN--FFCTVKICYNGI 224
           A+W  LN+ L ++  VL +R  +   + R++  Q+F    + I    F   V IC  G+
Sbjct: 105 AKWIRLNNNLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYILATVFLAYVWICEMGV 163


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 505 FLETKHVHAVVKARFFISLQLVCYLSIH--KTHQNFVELF 392
           +L  K    +   R FIS   +CYL  H  K+ + F E+F
Sbjct: 205 YLRLKPEGRISNRRVFISFSKICYLHQHLSKSVKLFNEVF 244


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 505 FLETKHVHAVVKARFFISLQLVCYLSIH--KTHQNFVELF 392
           +L  K    +   R FIS   +CYL  H  K+ + F E+F
Sbjct: 223 YLRLKPEGRISNRRVFISFSKICYLHQHLSKSVKLFNEVF 262


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/57 (19%), Positives = 28/57 (49%)
 Frame = -2

Query: 464 LLHISAVSLLLIYTQDAPKLCGVIRETFKMSQRKRKQINIEEKSRIMQIYFSNNSLP 294
           ++H    S+ +   Q   +   ++R  F  ++RKR+  + +    + + ++S+ S P
Sbjct: 200 IIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNP 256


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 475 VKARFFISLQLVCYLSIHKTHQNFVELFV 389
           +KA FF+S +   Y ++ + H+   E+ V
Sbjct: 227 IKATFFVSHKYTNYSAVQEMHRKGHEIAV 255


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 276 RYTLNITVFTTEYEQSLRCRYNRF*LYKKNCI 181
           RYT  +  + T  +    C YN    Y+++CI
Sbjct: 58  RYTFLLEWYHTLSKACYDCPYNTQDCYREDCI 89


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +3

Query: 174 ICIYNFFC 197
           +CIY+FFC
Sbjct: 164 LCIYHFFC 171


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 453 DMKKRALTTACTCFV 497
           D+ K A+ T C CFV
Sbjct: 193 DVVKGAMLTNCICFV 207


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 453 DMKKRALTTACTCFV 497
           D+ K A+ T C CFV
Sbjct: 193 DVVKGAMLTNCICFV 207


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 453 DMKKRALTTACTCFV 497
           D+ K A+ T C CFV
Sbjct: 193 DVVKGAMLTNCICFV 207


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 453 DMKKRALTTACTCFV 497
           D+ K A+ T C CFV
Sbjct: 193 DVVKGAMLTNCICFV 207


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 72  NSVLSFVPAVLNHRVVNP 125
           NS   F+P VL H+ V P
Sbjct: 5   NSTEKFLPTVLPHQEVPP 22


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 380 KMSQRKRKQINIEEKSRIMQIY 315
           +  +RK+ +  IEEKS+I  ++
Sbjct: 209 RAKERKQNKKRIEEKSQIDNLF 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,381
Number of Sequences: 336
Number of extensions: 3538
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)