Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0960
         (538 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0441 - 8517501-8517701,8518004-8518139,8519995-8520107,852...    30   1.3  
04_04_1356 + 32854585-32854832,32854948-32855148,32855270-328554...    29   2.3  
08_02_0099 + 12343518-12343678,12344193-12344393,12344669-123448...    28   4.1  
03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583...    28   4.1  
02_03_0356 + 18073794-18074052,18074054-18074163                       28   5.4  

>03_02_0441 -
           8517501-8517701,8518004-8518139,8519995-8520107,
           8520189-8520284,8520376-8520590,8520675-8520797,
           8520887-8520917,8521020-8521079,8521951-8522106,
           8522185-8522274,8522347-8522562,8522671-8522805,
           8522898-8523401,8523485-8523700,8524411-8524456,
           8524542-8524678,8525059-8525191,8526084-8526358
          Length = 960

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = +1

Query: 139 HNDTMEIYSDMLLKCFSIDITAVELGDTKRLICMTCISSCETASLSGFKLKPPY 300
           H D +E   D+L    +I I  +   D K ++   C S  +     GF +  PY
Sbjct: 655 HADVLEKQKDILDTVMNIYIKTMREDDDKEVVAQACTSLADIVRDCGFAIIEPY 708


>04_04_1356 +
           32854585-32854832,32854948-32855148,32855270-32855447,
           32856389-32856651,32856800-32857040,32857317-32858456,
           32858856-32858993
          Length = 802

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -3

Query: 197 MSMEKH-FNNISEYISMVSLCLCPVNILFTAPSLRHKLHTPSSGNISTII 51
           M ++ H F N S Y  + ++ L   ++LF    LRH L  P S   + ++
Sbjct: 713 MFVDLHPFTNTSPYTVVETMSLAKAHVLFREVGLRHLLVLPKSSKRAPVV 762


>08_02_0099 +
           12343518-12343678,12344193-12344393,12344669-12344846,
           12347201-12347463,12347596-12347874,12348045-12349182,
           12349303-12349473
          Length = 796

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -3

Query: 197 MSMEKH-FNNISEYISMVSLCLCPVNILFTAPSLRHKLHTPSSGNISTII 51
           M ++ H F N S Y  + ++ L    +LF    LRH L  P S + S ++
Sbjct: 696 MYVDLHPFTNTSPYTVVETMSLAKALVLFREVGLRHLLVVPKSCDRSPVV 745


>03_05_0712 - 27057858-27057941,27058093-27058182,27058268-27058384,
            27059759-27059866,27060314-27060406,27060499-27060669,
            27061505-27061757,27061860-27062138,27062939-27063273,
            27063364-27064332,27064711-27065182,27065243-27065291,
            27066564-27066804,27067606-27067695,27068172-27068294,
            27068365-27068418
          Length = 1175

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +1

Query: 220  TKRLICMTCISSCETASLSGFK-LKPPYTLWRI 315
            T+R + +  ++SC  A L GFK L+P +T+ ++
Sbjct: 1087 TERCMLLKFVTSCSRAPLLGFKYLQPSFTIHKV 1119


>02_03_0356 + 18073794-18074052,18074054-18074163
          Length = 122

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = -1

Query: 427 RACXXA*SXISLATTSPSASVLRSSKAPCDSTFSNLNVSSRVYKEAST*TLKATQSRNS 251
           R+   A S   L   SPSA V  S   P  STF NLN      +E++      T +R +
Sbjct: 49  RSLASACSKSKLTGLSPSAGVSPSRCPPTRSTFPNLNCMRSSKRESTRPFANVTIARRA 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,108,524
Number of Sequences: 37544
Number of extensions: 241516
Number of successful extensions: 561
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)