Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0960
         (538 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012498-1|AAS93769.1|  400|Drosophila melanogaster GM10157p pro...    30   1.7  
AY094791-1|AAM11144.1|  830|Drosophila melanogaster LD20292p pro...    30   1.7  
AE014296-3765|AAN11410.1|  830|Drosophila melanogaster CG32350-P...    30   1.7  
AY118441-1|AAM48470.1|  961|Drosophila melanogaster SD06668p pro...    28   7.0  
AE014297-3590|AAF56321.3|  961|Drosophila melanogaster CG6695-PA...    28   7.0  

>BT012498-1|AAS93769.1|  400|Drosophila melanogaster GM10157p
           protein.
          Length = 400

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 127 TGHKHNDTMEIYSDMLLKCFSIDITAVELGDTKRLICMTCISSCETASLSGFKLKP 294
           TG  HN+T++   + L+K  + D+ A+    +KR   M   SSC T  +   K+KP
Sbjct: 201 TGTLHNETIDKCIENLIKN-NPDV-ALNENLSKRSFLMMLKSSCSTEEIKAIKIKP 254


>AY094791-1|AAM11144.1|  830|Drosophila melanogaster LD20292p
           protein.
          Length = 830

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 127 TGHKHNDTMEIYSDMLLKCFSIDITAVELGDTKRLICMTCISSCETASLSGFKLKP 294
           TG  HN+T++   + L+K  + D+ A+    +KR   M   SSC T  +   K+KP
Sbjct: 631 TGTLHNETIDKCIENLIKN-NPDV-ALNENLSKRSFLMMLKSSCSTEEIKAIKIKP 684


>AE014296-3765|AAN11410.1|  830|Drosophila melanogaster CG32350-PA
           protein.
          Length = 830

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 127 TGHKHNDTMEIYSDMLLKCFSIDITAVELGDTKRLICMTCISSCETASLSGFKLKP 294
           TG  HN+T++   + L+K  + D+ A+    +KR   M   SSC T  +   K+KP
Sbjct: 631 TGTLHNETIDKCIENLIKN-NPDV-ALNENLSKRSFLMMLKSSCSTEEIKAIKIKP 684


>AY118441-1|AAM48470.1|  961|Drosophila melanogaster SD06668p
           protein.
          Length = 961

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
 Frame = -3

Query: 101 LRHKLHTPSSGNIS-----TIISESMFAYSTT 21
           LRHK  TPSSG +S     ++ SES  A S+T
Sbjct: 780 LRHKYGTPSSGKLSDSDAESVASESQLAKSST 811


>AE014297-3590|AAF56321.3|  961|Drosophila melanogaster CG6695-PA,
           isoform A protein.
          Length = 961

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
 Frame = -3

Query: 101 LRHKLHTPSSGNIS-----TIISESMFAYSTT 21
           LRHK  TPSSG +S     ++ SES  A S+T
Sbjct: 780 LRHKYGTPSSGKLSDSDAESVASESQLAKSST 811


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,807,285
Number of Sequences: 53049
Number of extensions: 416807
Number of successful extensions: 982
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)