Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0960
         (538 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000194-3|AAK39379.1|  191|Caenorhabditis elegans Hypothetical ...    28   3.7  
Z74474-1|CAA98954.2|  566|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z67735-2|CAA91530.2|  403|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z48638-9|CAA88569.1|  202|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein...    27   8.6  

>AF000194-3|AAK39379.1|  191|Caenorhabditis elegans Hypothetical
           protein ZC328.5 protein.
          Length = 191

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 391 ATTSPSASVLRSSKAPCDSTFSNL 320
           +TT+  +S  R SKAPC + F N+
Sbjct: 36  STTTVESSTTRDSKAPCMAVFENM 59


>Z74474-1|CAA98954.2|  566|Caenorhabditis elegans Hypothetical
           protein K10C8.1 protein.
          Length = 566

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 13/56 (23%), Positives = 27/56 (48%)
 Frame = -3

Query: 251 DMQVMHINLLVSPSSTAVMSMEKHFNNISEYISMVSLCLCPVNILFTAPSLRHKLH 84
           D  +  I L + P+S+  + M ++ +++ +Y+ +  L       LFT    +  LH
Sbjct: 177 DEPMQKIPLKMKPNSSVSLRMPRNLSSVEKYMIIYELTKAFPQFLFTCDEKQQNLH 232


>Z67735-2|CAA91530.2|  403|Caenorhabditis elegans Hypothetical
           protein C15A7.1 protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 400 ISLATTSPSASVLRSSKAPCDSTFSNLNVSSRV 302
           I++ T    A  L SSK P DS F N+ V  R+
Sbjct: 346 ITIMTKKQKAYFLNSSKFPLDSGFFNIRVLRRL 378


>Z48638-9|CAA88569.1|  202|Caenorhabditis elegans Hypothetical
           protein ZK892.7 protein.
          Length = 202

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 220 TKRLICMTCISSCETASLSGFKLK 291
           TK   C+ C+S+CE A + G  +K
Sbjct: 36  TKNHTCLICVSNCEGAPILGESIK 59


>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
            C10C6.1 protein.
          Length = 1565

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -1

Query: 481  PSLLDTLERFRRHHLHQRRACXXA*SXISLATTSPSASVLRSSKAPCDSTFSNLNVSS 308
            PS L +      HH H       A +  +L +T+PS     +S +P  S+ SN   SS
Sbjct: 1374 PSSLRSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRMASSSP-SSSASNSGTSS 1430


>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
            protein.
          Length = 1565

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -1

Query: 481  PSLLDTLERFRRHHLHQRRACXXA*SXISLATTSPSASVLRSSKAPCDSTFSNLNVSS 308
            PS L +      HH H       A +  +L +T+PS     +S +P  S+ SN   SS
Sbjct: 1374 PSSLRSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRMASSSP-SSSASNSGTSS 1430


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,983,244
Number of Sequences: 27780
Number of extensions: 207594
Number of successful extensions: 578
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)