Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0956
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 34 0.057
SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.099
SB_13882| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.2e-13) 33 0.099
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 32 0.23
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.23
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 1.6
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 29 1.6
SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20) 29 2.8
SB_58026| Best HMM Match : ANF_receptor (HMM E-Value=0) 28 3.7
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 3.7
SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_44915| Best HMM Match : VWA (HMM E-Value=0) 28 4.9
SB_36366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 27 6.5
SB_11328| Best HMM Match : PAN (HMM E-Value=7.1e-06) 27 8.6
SB_51531| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_48390| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_12451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 34.3 bits (75), Expect = 0.057
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
Frame = +1
Query: 31 VCGTDYCE-KNPCIQPPLVCPKNTEHRARXAGKCACC---------PACVTLLGEGATCK 180
VCG+D +N C L CPKN + G CA C CVT L + A C
Sbjct: 1157 VCGSDKVSYRNKCYMIALNCPKNKYVYVKHEGYCAPCRLAECHKVYAKCVTTLYQTARCV 1216
Query: 181 IYS-KELGETPSAVCKEPLK 237
+ +E AVC +K
Sbjct: 1217 CPTLQECAARKGAVCASDMK 1236
Score = 31.1 bits (67), Expect = 0.53
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +1
Query: 25 ALVCGTD-YCEKNPCIQPPLVCPKNTEHRARXAGKCACCPACVTLLGEGATCKIYSKELG 201
A VCGTD + CI C R + AG+C C V G C + G
Sbjct: 372 APVCGTDDRTYPSECIMKTSACADKKAVRVKHAGECGPCGTLVCT--NGKNC--VTSHQG 427
Query: 202 ETPSAVCKEP 231
T AVC P
Sbjct: 428 LTRQAVCACP 437
>SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2956
Score = 33.5 bits (73), Expect = 0.099
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Frame = +1
Query: 82 VCPKNTEHRARXAGKCACCPACVTLLG-EGAT-------CKIYSKELGETPSAVCKEPLK 237
+CP NT KC CPA ++ G +GAT CK Y E ++ +K
Sbjct: 2764 LCPPNTYQDQEQQSKCHMCPAGLSTFGLQGATSKDQCRECKDYEPEDKYGDCTTWRQQMK 2823
Query: 238 CIK 246
C+K
Sbjct: 2824 CVK 2826
>SB_13882| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.2e-13)
Length = 340
Score = 33.5 bits (73), Expect = 0.099
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Frame = +1
Query: 82 VCPKNTEHRARXAGKCACCPACVTLLG-EGAT-------CKIYSKELGETPSAVCKEPLK 237
+CP NT KC CPA ++ G +GAT CK Y E ++ +K
Sbjct: 65 LCPPNTYQDQEQQSKCHMCPAGLSTFGLQGATSKDQCRECKDYEPEDKYGDCTTWRQQMK 124
Query: 238 CIK 246
C+K
Sbjct: 125 CVK 127
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +1
Query: 67 IQPPLVCPKNTEHRARXAGKCACCPACVTLLGEGATCKIYSKELGETPSAVCKEPLKC 240
++P L CPK T A C+ CP + G GA ++ S+ C+ +C
Sbjct: 390 VEPCLPCPKGTYQTAIGQMSCSECPGTKSTHGPGADSHDMCLDIDNCASSPCQNGGRC 447
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 32.3 bits (70), Expect = 0.23
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 VCGTDY-CEKNPCIQPPLVCPKNTEHRARXAGKCACCPACVTLLGEGATCKIYSKELGET 207
VCG+D N C+ C NT R G C C +TCK +
Sbjct: 1217 VCGSDNNTYDNECLMRQQACVANTTVAVRRKGDCDPCSNVTCDSPPYSTCKAQD----DQ 1272
Query: 208 PSAVCKEPL-KCIKRV 252
P+ VC EP K +K V
Sbjct: 1273 PTCVCVEPCPKTLKPV 1288
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 28 LVCGTDYCE-KNPCIQPPLVCPKNTEHRARXAGKCACC 138
LVCGTD N C+ C N+ + + G C C
Sbjct: 1519 LVCGTDNITYSNECLMKYQACRTNSALKVKRKGDCDVC 1556
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.9 bits (69), Expect = 0.30
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = +1
Query: 34 CGTDYCEKNPCIQPPLVCPKNTEHRARXAGKCACCPACVTLLGEGATCKIYSKELGETPS 213
C + C KN PP+VCPK+ E CC C SK + + P
Sbjct: 1785 CPSTCCIKN---SPPVVCPKSCETTCTPDCPVMCCKNSSPATECPTICA--SKCISKCPE 1839
Query: 214 AVCKEP 231
CK+P
Sbjct: 1840 KCCKQP 1845
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Frame = +1
Query: 31 VCGTD-YCEKNPCIQPPLVCPKNTEHRARXAGKCA-----CCPAC 147
VCG+D NPC+ VC N + R + G C C P C
Sbjct: 129 VCGSDGKTYDNPCVFKIAVCQMNGQLRLKHRGACGSRPDKCAPIC 173
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = +1
Query: 31 VCGTDYCE-KNPCIQPPLVCPKNTEHRARXAGKCACCPACVTLLGEGA-TCKIYSKE--L 198
VCG+D NPC+ C N + GKC +C +G CK+ +
Sbjct: 180 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQSCEQKKCKGTKVCKMIGNKPRC 239
Query: 199 GETPSAVCKEPLKC 240
P C E ++C
Sbjct: 240 MRPPQTDCSE-VRC 252
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +1
Query: 31 VCGTDYCE-KNPCIQPPLVCPKNTEHRARXAGKCACCPACVTLLGEGA-TCKIYSKELGE 204
VCG+D NPC+ C N + GKC +C +G CK+ +G
Sbjct: 37 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQSCEQKKCKGTKVCKM----IGN 92
Query: 205 TPSAVCKEPLKCIK 246
P + C K
Sbjct: 93 KPRCMRPPQTACSK 106
>SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20)
Length = 87
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +1
Query: 31 VCGTDY-CEKNPCIQPPLVCPKNTEHRARXAGKCACCP 141
VCG+D N C+ C NT R G C CP
Sbjct: 10 VCGSDNNTYDNECLMRQQACVANTTVAVRRKGDCEPCP 47
>SB_58026| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 850
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 37 GTDYCEKNPCIQPPLVCPKNTEHRARXAGKCACCPACVTLLGEGATC 177
GT E C L CP+ T R A C+ CP E +C
Sbjct: 506 GTMQSESVACCWECLQCPEGTVTSIRGATNCSTCPVTQKSNRERTSC 552
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +1
Query: 31 VCGTDY-CEKNPCIQPPLVCPKNTEHRARXAGKCACCP 141
VCGTD N C+ C N R G C CP
Sbjct: 172 VCGTDNNTYDNECLMRQQACVANATVAVRRKGHCEPCP 209
>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 19 YGALVCGTDYCEKNPCIQPPLVCPKNTEHRARXAG 123
YG Y EK+P + PP V PK+ AR G
Sbjct: 884 YGKTFRLNGYNEKSPKVSPPPVKPKSYSPEARWCG 918
>SB_44915| Best HMM Match : VWA (HMM E-Value=0)
Length = 541
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 106 RARXAGKCACCPACVTLLGE-GATCKIYSKELGETPSAVCKEPLKCIKRV*LSLC 267
RA AG A PA GE G CK ++ E S+ C+ CIK+V C
Sbjct: 15 RAIGAGLFAITPA-----GERGMCCKAIKLDVDECSSSPCQNGASCIKKVGRYFC 64
>SB_36366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 366 HCSKYRNLKLKNMN 407
HCSKYRN+K K +N
Sbjct: 264 HCSKYRNIKQKYIN 277
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 121 GKCACCPACVTLLGEGATCKIYSKELGETPSAVCKEPLKC 240
G CC C + G CK+ K T C E KC
Sbjct: 546 GSLCCCTECARVCHRGHDCKL--KRTSPTAYCDCWEKCKC 583
>SB_11328| Best HMM Match : PAN (HMM E-Value=7.1e-06)
Length = 435
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 127 CACCPACVTLLGEGATCKIYSKELGETPSAVCKEP 231
CA CV++ GATC++ SK P + P
Sbjct: 53 CASANGCVSINHYGATCELNSKSQFTAPQSFGTRP 87
>SB_51531| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 132 LLSRLCNFTW*RCNLQDLFEGTRRNPL 212
LL CN T RCN+ D +G R P+
Sbjct: 22 LLDVGCNDTHTRCNINDALKGIHRAPI 48
>SB_48390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 58 NPCIQPPLVCPKNTEHRARXAGKCACCPACV 150
N C+ P L C N E+R R K CC + +
Sbjct: 162 NSCLNPFLYCLTNKEYR-REFTKLLCCKSAI 191
>SB_12451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 37 GTDYCEKNPCIQPPLVCPKNTE 102
G+ C + P IQPP VCP +E
Sbjct: 143 GSLCCARFPIIQPPSVCPALSE 164
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,302,140
Number of Sequences: 59808
Number of extensions: 300646
Number of successful extensions: 674
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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