Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0956
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical pr...    31   0.35 
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass...    30   1.1  
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.     30   1.1  
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.     30   1.1  
Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p...    28   4.3  
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AF125964-6|AAD14755.2|  589|Caenorhabditis elegans Acid sphingom...    27   5.7  
AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine re...    27   5.7  
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical
           protein T10E10.4 protein.
          Length = 966

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
 Frame = +1

Query: 37  GTDYCEKNPCIQPPLVCPKNTEHRARXAGKCA-CCPACVTLLGEGATCKIYSKELGETPS 213
           G D C    C   P  CP N     R +G C  CCP   T +  G  C + S   G    
Sbjct: 530 GVD-CNNGACCPLP-TCPNNIASSQRCSGGCTNCCPVGQTCM-NGGCCDLPSCPSGGFAI 586

Query: 214 AVC 222
           ++C
Sbjct: 587 SMC 589


>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 152, isoform a protein.
          Length = 2560

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
 Frame = +1

Query: 37  GTDYCEKNPCIQPPLVCPKNTEHRARXA-GKCACCPACVTLLGEGATCKIYSKELGETPS 213
           GT   +++P +   LVC  N   R     GKC C P       + A C +     G    
Sbjct: 302 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 360

Query: 214 AVC 222
            +C
Sbjct: 361 GIC 363


>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
          Length = 2502

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
 Frame = +1

Query: 37  GTDYCEKNPCIQPPLVCPKNTEHRARXA-GKCACCPACVTLLGEGATCKIYSKELGETPS 213
           GT   +++P +   LVC  N   R     GKC C P       + A C +     G    
Sbjct: 244 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 302

Query: 214 AVC 222
            +C
Sbjct: 303 GIC 305


>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
          Length = 2684

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
 Frame = +1

Query: 37  GTDYCEKNPCIQPPLVCPKNTEHRARXA-GKCACCPACVTLLGEGATCKIYSKELGETPS 213
           GT   +++P +   LVC  N   R     GKC C P       + A C +     G    
Sbjct: 426 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 484

Query: 214 AVC 222
            +C
Sbjct: 485 GIC 487


>Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical
           protein C46C2.6a protein.
          Length = 195

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +1

Query: 85  CPKNTEHRARXAGKCACCPACVTLLGEGATC-KIYSKELGETPSAVCK-EPLKC 240
           CP + +   + +G+CA   AC+     G  C K++S ++  T    CK +P+ C
Sbjct: 60  CPSDYDFIRQHSGRCADGTACIPDSSFGEPCIKLFSYQM--TKKFCCKSDPIDC 111


>Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK1058.6 protein.
          Length = 305

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 145 CVTLLGEGATCKIYSKELGETPSAVCKE 228
           CV   G+G+T  ++S  +G+  SA+C E
Sbjct: 137 CVWGQGDGSTMPVFSTSVGKIGSAICWE 164


>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
           protein F48E3.8a protein.
          Length = 2427

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
 Frame = +1

Query: 7   CVXAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARXAGKCACCPACVTLLGEGATCKIY 186
           C    GAL  GT     +  IQ  + CP    +  R AG       C+T+   G  C+ Y
Sbjct: 59  CQCVKGALNTGTTCIASSTAIQTSVACPAGQTY-IREAG------VCMTVQQPGEPCQ-Y 110

Query: 187 SKELGE-TPSAVC-KEPLKCI 243
           S++     P A C K   +C+
Sbjct: 111 SQQCSALEPGAYCLKMRCECV 131


>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
           protein F48E3.8b protein.
          Length = 1299

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
 Frame = +1

Query: 7   CVXAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARXAGKCACCPACVTLLGEGATCKIY 186
           C    GAL  GT     +  IQ  + CP    +  R AG       C+T+   G  C+ Y
Sbjct: 59  CQCVKGALNTGTTCIASSTAIQTSVACPAGQTY-IREAG------VCMTVQQPGEPCQ-Y 110

Query: 187 SKELGE-TPSAVC-KEPLKCI 243
           S++     P A C K   +C+
Sbjct: 111 SQQCSALEPGAYCLKMRCECV 131


>AF125964-6|AAD14755.2|  589|Caenorhabditis elegans Acid
           sphingomyelinase protein 3 protein.
          Length = 589

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +1

Query: 223 KEPLKCIKRV*LSLCSRFH*QENISLQYFYHDLFEI*FVYGIKLIII 363
           K+  +C+  + + +C  FH ++N    +   D F   F+Y IK I++
Sbjct: 38  KKTEECVMEIAVFICETFHIEDNDVCNFIISD-FSDEFMYVIKQILV 83


>AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine
           receptor, class w protein40 protein.
          Length = 363

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = -3

Query: 491 VTYIVPIS*QGYLYNTYYFIXFLFGLLKI-----HIF*FQISIFTTVHIIINFIPYTNY 330
           V +++P   +G LY + +F+    GL  I      IF    +I  ++H++I ++  TNY
Sbjct: 277 VMFLIPTLIKGTLYLSRFFVYKCVGLTDIIDNLAIIFTLLTNINGSIHLLICYLMATNY 335


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
 Frame = +1

Query: 61  PCIQPPLVCPKNTEHRARXAGKCACCPACVTLLGEGA-------TCKIYSKELGETPSAV 219
           PC++P   C  +  H+      C  C      +  G         C I S   G     V
Sbjct: 642 PCVRPHS-CDHSVSHKCHGEQNCPPCTQLTEKMCYGGHRVRKNIPCHIDSVSCG----VV 696

Query: 220 CKEPLKC 240
           CK+PLKC
Sbjct: 697 CKKPLKC 703


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,428,972
Number of Sequences: 27780
Number of extensions: 225854
Number of successful extensions: 523
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)