Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0955
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80226-1|AAB38510.1|  500|Homo sapiens gamma-aminobutyric acid t...    30   7.2  

>U80226-1|AAB38510.1|  500|Homo sapiens gamma-aminobutyric acid
           transaminase protein.
          Length = 500

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = -1

Query: 409 CSVNIYPKLVXRI-VDLFKSAAETFHKDKXPNFLREILQKNTENIYQEVKYKQERRSFYI 233
           C    + K + +I +  F     TF + K P  L E +++N +   +E +  +E     I
Sbjct: 224 CLATTHSKAIHKIDIPSFDWPIATFPRLKYP--LEEFVKENQQ---EEARCLEEVEDL-I 277

Query: 232 IKYRKFNLTSFGIIIITAIGAELQNEGKDN 143
           +KYRK   T  GII+       +Q+EG DN
Sbjct: 278 VKYRKKKKTVAGIIV-----EPIQSEGGDN 302


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,894,865
Number of Sequences: 237096
Number of extensions: 1450308
Number of successful extensions: 2089
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2089
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)