Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0955
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023142-1|AAY55558.1|  704|Drosophila melanogaster IP08936p pro...    29   6.3  
BT022131-1|AAY51526.1|  704|Drosophila melanogaster IP08836p pro...    29   6.3  
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r...    29   6.3  
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,...    29   6.3  
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,...    29   6.3  
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,...    29   6.3  

>BT023142-1|AAY55558.1|  704|Drosophila melanogaster IP08936p
           protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -3

Query: 197 NNHYNRNRGRIAKRGK 150
           NNH NR+RG  AKRG+
Sbjct: 64  NNHTNRSRGSAAKRGR 79


>BT022131-1|AAY51526.1|  704|Drosophila melanogaster IP08836p
           protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -3

Query: 197 NNHYNRNRGRIAKRGK 150
           NNH NR+RG  AKRG+
Sbjct: 64  NNHTNRSRGSAAKRGR 79


>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
           remodeling factor largesubunit NURF301 protein.
          Length = 2669

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -3

Query: 197 NNHYNRNRGRIAKRGK 150
           NNH NR+RG  AKRG+
Sbjct: 64  NNHTNRSRGSAAKRGR 79


>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
           isoform C protein.
          Length = 2159

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -3

Query: 197 NNHYNRNRGRIAKRGK 150
           NNH NR+RG  AKRG+
Sbjct: 64  NNHTNRSRGSAAKRGR 79


>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
           isoform A protein.
          Length = 2669

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -3

Query: 197 NNHYNRNRGRIAKRGK 150
           NNH NR+RG  AKRG+
Sbjct: 64  NNHTNRSRGSAAKRGR 79


>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
           isoform B protein.
          Length = 2649

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -3

Query: 197 NNHYNRNRGRIAKRGK 150
           NNH NR+RG  AKRG+
Sbjct: 64  NNHTNRSRGSAAKRGR 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,995,932
Number of Sequences: 53049
Number of extensions: 430541
Number of successful extensions: 995
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)