Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0955
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.20
U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical pr... 30 1.1
AY849796-1|AAW34234.1| 517|Caenorhabditis elegans acetylcholine... 30 1.1
AL021175-6|CAA15968.1| 363|Caenorhabditis elegans Hypothetical ... 30 1.4
Z83104-3|CAB05476.1| 295|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 28 5.8
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 28 5.8
Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81473-8|CAB03899.2| 418|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81473-4|CAB03891.1| 463|Caenorhabditis elegans Hypothetical pr... 27 7.7
AL031636-1|CAA21046.2| 418|Caenorhabditis elegans Hypothetical ... 27 7.7
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 445 LCIQXPFDHSRNCSVNIYPKLVXRIVDLFKSAAETFHKDKXP 320
LC++ PFD S N S + K+ I+ +F ++ F +K P
Sbjct: 1286 LCVEDPFDLSHNLSSGVNKKMFVFIMKVFINSRAVFMSEKPP 1327
>U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical
protein F55D10.5 protein.
Length = 517
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 558 YLGFPIRKKSLDLFLTNFPYINIMLPLKYANHCDWTPPY-VYKXRLITPEIALSIY 394
+ FP+ ++S L L +F Y N + +++ N WT P + K ++ P+ +S Y
Sbjct: 195 FSAFPMDQQSCHLTLESFSYNNQEVDMQWMN---WTTPLSLLKKEIVLPDFVMSNY 247
>AY849796-1|AAW34234.1| 517|Caenorhabditis elegans
acetylcholine-gated chloride channelsubunit ACC-3
protein.
Length = 517
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 558 YLGFPIRKKSLDLFLTNFPYINIMLPLKYANHCDWTPPY-VYKXRLITPEIALSIY 394
+ FP+ ++S L L +F Y N + +++ N WT P + K ++ P+ +S Y
Sbjct: 195 FSAFPMDQQSCHLTLESFSYNNQEVDMQWMN---WTTPLSLLKKEIVLPDFVMSNY 247
>AL021175-6|CAA15968.1| 363|Caenorhabditis elegans Hypothetical
protein Y6E2A.7 protein.
Length = 363
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = -1
Query: 268 VKYKQERRSFYIIKYRKFNLTSFGIIIITAIGAELQNEGKDNLFFFFY 125
+KYKQ++R + +Y KF + S + T +++ EG D F++ +
Sbjct: 123 IKYKQQKRWSKMFEYCKFYVDSILEQLRTQYHLDIRIEGDDGKFYYTF 170
>Z83104-3|CAB05476.1| 295|Caenorhabditis elegans Hypothetical
protein F09B12.2 protein.
Length = 295
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 451 CPVAMVCILQRQHYVDIRKIC 513
CPV VCIL+R H+ +C
Sbjct: 119 CPVCDVCILRRDHHCSFGAVC 139
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = -1
Query: 334 KDKXPNFLREILQKNTENIYQ-EVKYKQERRSFYIIKYRKFNLTSFGIIIITAIGAELQN 158
K K L +I KN + + ++ ++ S +I++ + + SF +I+ + +
Sbjct: 162 KSKQNTSLYQIQMKNINDSHNMQLSIEKSNASLAVIQHSESCIESFNVILGLLKDMKELS 221
Query: 157 EGKDNLFFFFYKMIKYACIMI---KSKIKF 77
E KD+ K IKY I KSK++F
Sbjct: 222 ENKDHYLPADLKKIKYTSDEIEKHKSKLEF 251
>Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical
protein ZK1067.5 protein.
Length = 427
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 276 YIFSVFFCKISLRKLGFLSL*NVSAADLKRSTILXTNLGYILTEQFLE*SNGSCIHKEVS 455
++ S +FC +SL +GF L V + +I+ +G ILT ++ S I K S
Sbjct: 320 FLDSFYFCLVSLLTVGFGDLHPVGTVEYMLCSIVFIFIGLILTTLAVDVSGSVGIAKMHS 379
Query: 456 SRNG 467
G
Sbjct: 380 IGRG 383
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -1
Query: 577 RKYNMXIFRIPDKKKKLGLILNKFSLYQHNVAAEVCKPLRLDTSL 443
R+ N + DKKK L IL++ ++ + N +CK + L +++
Sbjct: 240 RRINTELTSSKDKKKTLSGILDEIAMKRSNSKTRLCKLMELRSAV 284
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -1
Query: 577 RKYNMXIFRIPDKKKKLGLILNKFSLYQHNVAAEVCKPLRLDTSL 443
R+ N + DKKK L IL++ ++ + N +CK + L +++
Sbjct: 240 RRINTELTSSKDKKKTLSGILDEIAMKRSNSKTRLCKLMELRSAV 284
>Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical
protein T20B3.3 protein.
Length = 332
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 298 QKNTENIYQEVK-YKQERRSFYIIKYRKFNLTSFGIIII 185
+KN N+++ V Y + + FY+I +KF L S GI I+
Sbjct: 165 KKNFINLFECVPPYVELKNVFYLILVKKFFLISCGIFIM 203
>Z81473-8|CAB03899.2| 418|Caenorhabditis elegans Hypothetical
protein Y47H9A.1 protein.
Length = 418
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1
Query: 337 HKDKXPNFLREILQKNTENIYQEVKY----KQERRSFYIIKYRKFNLTSFGIIIITAI 176
H +K + ++ + KN E E Y ++++R+ + Y KFNLTS G ++ T +
Sbjct: 97 HTNKDGSAVKPFIVKNVERHSDEEPYDVYLQKKKRNEEGMIYWKFNLTSTGKVLETLV 154
>Z81473-4|CAB03891.1| 463|Caenorhabditis elegans Hypothetical
protein C17D12.3 protein.
Length = 463
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1
Query: 337 HKDKXPNFLREILQKNTENIYQEVKY----KQERRSFYIIKYRKFNLTSFGIIIITAI 176
H +K + ++ + KN E E Y ++++R+ + Y KFNLTS G ++ T +
Sbjct: 97 HTNKDGSAVKPFIVKNVERHSDEEPYDVYLQKKKRNEEGMIYWKFNLTSTGKVLETLV 154
>AL031636-1|CAA21046.2| 418|Caenorhabditis elegans Hypothetical
protein Y47H9A.1 protein.
Length = 418
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1
Query: 337 HKDKXPNFLREILQKNTENIYQEVKY----KQERRSFYIIKYRKFNLTSFGIIIITAI 176
H +K + ++ + KN E E Y ++++R+ + Y KFNLTS G ++ T +
Sbjct: 97 HTNKDGSAVKPFIVKNVERHSDEEPYDVYLQKKKRNEEGMIYWKFNLTSTGKVLETLV 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,732,381
Number of Sequences: 27780
Number of extensions: 253304
Number of successful extensions: 687
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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