Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0953
         (449 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q184Z0 Cluster: Putative uncharacterized protein; n=1; ...    35   0.71 
UniRef50_UPI00005F9BBB Cluster: COG0583: Transcriptional regulat...    33   3.8  
UniRef50_Q4P3U8 Cluster: Putative uncharacterized protein; n=1; ...    32   6.6  
UniRef50_Q677X1 Cluster: Ervl/Alr family protein; n=2; Lymphocys...    31   8.8  

>UniRef50_Q184Z0 Cluster: Putative uncharacterized protein; n=1;
           Clostridium difficile 630|Rep: Putative uncharacterized
           protein - Clostridium difficile (strain 630)
          Length = 637

 Score = 35.1 bits (77), Expect = 0.71
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 287 HDSIPSLTNESWKQTFWCSNHHLXPQST-KVKTIMILGCC 171
           HDS+PS+ N +  +  WCSN  +   ST + +  + LG C
Sbjct: 557 HDSLPSILNSALNRALWCSNDPICIDSTGQGRNSLNLGAC 596


>UniRef50_UPI00005F9BBB Cluster: COG0583: Transcriptional regulator;
           n=1; Yersinia intermedia ATCC 29909|Rep: COG0583:
           Transcriptional regulator - Yersinia intermedia ATCC
           29909
          Length = 296

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 174 TTKNHYRLDLRTLGXKMVVRTPKGLFPTFVCQ 269
           TT+ H     ++LG K+ +RTP GL PT   Q
Sbjct: 36  TTRRHIESLEQSLGQKLFIRTPSGLIPTETAQ 67


>UniRef50_Q4P3U8 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 650

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 213 PEYEGQDDNDSWLLHRQKFLEETE 142
           PE E + + DSWLLH+Q  LE  E
Sbjct: 206 PEPEPEPERDSWLLHKQDCLETVE 229


>UniRef50_Q677X1 Cluster: Ervl/Alr family protein; n=2;
           Lymphocystivirus|Rep: Ervl/Alr family protein -
           Lymphocystis disease virus - isolate China
          Length = 145

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 153 PRTFACATTKNHYRLDLRTLGXKMVVRTPKGLF 251
           P    C+T KNHY+  +  +  K VV T K LF
Sbjct: 65  PALIPCSTCKNHYKEIMIRVDLKKVVHTKKSLF 97


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 356,738,579
Number of Sequences: 1657284
Number of extensions: 6421537
Number of successful extensions: 18888
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18258
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)