Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0953
         (449 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_53540| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.3  
SB_8346| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   1.3  
SB_49283| Best HMM Match : NapE (HMM E-Value=1.7)                      29   1.3  
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.3  
SB_33334| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.1  
SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12)           27   9.5  

>SB_53540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 254

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 303 WFRRQELRHVCSHVACSPN 359
           W RR+E   VCS V C P+
Sbjct: 217 WIRREETGQVCSQVTCEPS 235


>SB_8346| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 93

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -3

Query: 210 EYEGQDDNDSWLLHRQKFLEETEQK 136
           E EG+D+N+  +  RQK+++E E++
Sbjct: 63  EDEGEDENEETIYKRQKYIDEDEEE 87


>SB_49283| Best HMM Match : NapE (HMM E-Value=1.7)
          Length = 363

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -3

Query: 210 EYEGQDDNDSWLLHRQKFLEETEQK 136
           E EG+D+N+  +  RQK+++E E++
Sbjct: 333 EDEGEDENEETIYKRQKYIDEDEEE 357


>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1202

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 75   PKLKKNLINITF-QH-YLPTSNPSAQFPPRTFACATTKNHYRLDLRTLGXKM 224
            P L++NL+   F QH Y P+ N +++F         TKN  +L +R +  K+
Sbjct: 1146 PDLRRNLVIQLFNQHGYFPSENITSEFQQAHVEVFPTKNCLQLKIREVRQKL 1197


>SB_33334| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 761

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
 Frame = +3

Query: 264 CQGWYRIVYRQXNWFR----RQELRHVCSHVACSPN 359
           CQ W     R  NW R    R + +H+     CSPN
Sbjct: 219 CQNWLSSNLRLTNWKRKLGCRCQYKHIVDWCGCSPN 254


>SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12)
          Length = 906

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 166 PVQQPRIIIVLTFVLWGXRWWFEHQKVCFQ 255
           PV   R+ +   FV  G   WF HQ  C Q
Sbjct: 850 PVVLSRVAVTSGFVTSGCHQWFCHQWFCHQ 879


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,209,948
Number of Sequences: 59808
Number of extensions: 208556
Number of successful extensions: 608
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)