Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0950
         (500 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    33   0.12 
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    29   2.5  
Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    28   4.4  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    27   7.6  

>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = +2

Query: 266 VLSVCSPYFXXMF--KMNPTQHPIVFXTDVSHSALRDLLQFMYQGEVNVKXEELASFXST 439
           VLS CSPYF  MF  +M       +   ++    L  L++F Y G + +    +      
Sbjct: 73  VLSACSPYFLSMFTSQMAECYMREINMEEIEPPTLEALIEFCYTGAIAIDDSNVQDILPA 132

Query: 440 AGQLQV 457
           A  LQ+
Sbjct: 133 ACLLQI 138


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +2

Query: 266 VLSVCSPYFXXMFKMNPTQHPI--VFXTDVSHSALRDLLQFMYQGEVNVKXEELASFXST 439
           +L+   PYF  MF ++  +  +  +   D+++  +  LL F Y GE+ +    + S    
Sbjct: 68  ILAATIPYFRGMFTLDLMEANMKEINIEDMNYETVDALLSFAYTGELRITTSNVQSIMLG 127

Query: 440 AGQLQV 457
           A   Q+
Sbjct: 128 ANFFQM 133


>Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical
           protein F27C8.5 protein.
          Length = 565

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +2

Query: 341 TDVSHSALRDLLQFMYQGEVNVKXEELASFXSTAGQLQVXXL 466
           TD    ++R +  +MY GE+++    +A   + A  L+V  L
Sbjct: 77  TDFDPDSVRRVFDWMYSGEIDIPETTIADVLAVASYLRVTML 118


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +2

Query: 266 VLSVCSPYFXXMFKMNPTQHPI----VFXTDVSHSALRDLLQFMYQGEVNVKXEELASFX 433
           +L+   PYF  MF ++  +  +    +  +D+++  +  LL F Y GE+ +    + S  
Sbjct: 68  ILAATIPYFRGMFTLDLMEANMKEINIEDSDMNYETVDALLSFAYTGELRITTSNVQSIM 127

Query: 434 STAGQLQV 457
             A   Q+
Sbjct: 128 LGANFFQM 135


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
            protein Y38C9A.1 protein.
          Length = 1484

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 218  TRSPRDSRP*KPADIFAWKLFQHSENCSSDAM 123
            TRSP+  +P KP    ++  FQ+S + SS A+
Sbjct: 1362 TRSPQVQKPIKPTASRSFTSFQNSPSTSSSAL 1393


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,478,443
Number of Sequences: 27780
Number of extensions: 158542
Number of successful extensions: 281
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)