Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0950
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      71   5e-15
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          60   2e-11
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   4e-05
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   4.1  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   9.5  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   9.5  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 71.3 bits (167), Expect = 5e-15
 Identities = 33/68 (48%), Positives = 43/68 (63%)
 Frame = +2

Query: 266 VLSVCSPYFXXMFKMNPTQHPIVFXTDVSHSALRDLLQFMYQGEVNVKXEELASFXSTAG 445
           VLS CSPYF  + K  P +HP++   DV+ S L  L++F+Y GEVNV    L+SF  TA 
Sbjct: 49  VLSACSPYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAE 108

Query: 446 QLQVXXLT 469
            L+V  LT
Sbjct: 109 VLRVSGLT 116



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 124 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 240
           M   + F L WNN+ +++++ F  L    D VDVTLA +
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACD 39


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 59.7 bits (138), Expect = 2e-11
 Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = +2

Query: 266 VLSVCSPYFXXMFKMNPTQHP-IVFXTDVSHSALRDLLQFMYQGEVNVKXEELASFXSTA 442
           VLS CS YF  +   NP +HP I+   DV  + L+ +++F+Y+GE++V   EL S   TA
Sbjct: 53  VLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTA 112

Query: 443 GQLQVXXL 466
            QL++  L
Sbjct: 113 DQLKIKGL 120



 Score = 39.9 bits (89), Expect = 1e-05
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 136 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEE 243
           + + L WNN+ +NM++ FH LL     VDVTLA  E
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNE 44


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 38.3 bits (85), Expect = 4e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 124 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 240
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 100 VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTL 231
           V R +VA++ +   F +CW  FHA      +   S+    DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 101 FHVESSLSWRRTNNFHY 151
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 371 LLQFMYQGEVNVKXEELASF 430
           ++  +Y G VNV+ E + S+
Sbjct: 43  IIDEVYNGNVNVEDENVQSY 62


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 122 SWRRTNNFHY 151
           SWR T+NF Y
Sbjct: 209 SWRITHNFFY 218


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,996
Number of Sequences: 438
Number of extensions: 1789
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)