Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0947
         (548 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0136 + 14109557-14109661,14109742-14109804                       33   0.20 
01_01_0231 + 1951047-1951499                                           32   0.26 
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457           32   0.26 
03_02_0478 + 8775892-8776377                                           32   0.35 
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015           32   0.35 
05_03_0545 - 15244647-15245147,15245342-15245635                       31   0.46 
03_02_0485 - 8808139-8808618                                           31   0.46 
03_02_0484 + 8805053-8805538                                           31   0.61 
03_02_0483 - 8804021-8804485                                           31   0.61 
01_01_0229 - 1943473-1943922                                           30   1.4  
07_01_1127 + 10456895-10457388,10457488-10458112                       29   2.4  
09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786     29   3.2  
09_03_0036 + 11772940-11773171,11774995-11775104                       29   3.2  
04_01_0252 - 3329712-3331061                                           29   3.2  
03_01_0491 + 3720842-3720958,3721904-3723109                           28   4.3  
06_03_0390 - 20280355-20281178,20281392-20281565,20281613-20281847     28   5.6  
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807...    28   5.6  
09_06_0096 - 20840855-20841994                                         27   7.5  
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458...    27   7.5  
03_05_0124 + 21034963-21035181,21035618-21037466,21037485-210381...    27   7.5  
01_07_0105 - 41104655-41104851,41105818-41107150                       27   9.9  
01_01_0227 + 1933247-1933699                                           27   9.9  

>12_02_0136 + 14109557-14109661,14109742-14109804
          Length = 55

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 189 PPCEQRILPPVGHLAAAARD 248
           PPC +R+LPP+ HL   AR+
Sbjct: 8   PPCRRRLLPPIAHLLPHARE 27


>01_01_0231 + 1951047-1951499
          Length = 150

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
 Frame = +2

Query: 296 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 451
           D+     EE+ V+  +G + V+ G+     E+K D+   + R   QF RR+ LPE    +
Sbjct: 59  DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118

Query: 452 SVESG 466
            V++G
Sbjct: 119 QVKAG 123


>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
          Length = 438

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
 Frame = +2

Query: 296 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 451
           D+     EE+ V+  +G + V+ G+     E+K D+   + R   QF RR+ LPE    +
Sbjct: 59  DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118

Query: 452 SVESG 466
            V++G
Sbjct: 119 QVKAG 123


>03_02_0478 + 8775892-8776377
          Length = 161

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
 Frame = +2

Query: 296 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 451
           DV     EE+ V+  DG I+ + G+     EEK DQ   + R   +F RR+ LP+    E
Sbjct: 70  DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129

Query: 452 SVES 463
            +++
Sbjct: 130 QIKA 133


>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
          Length = 327

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 12/47 (25%), Positives = 28/47 (59%)
 Frame = +2

Query: 248 PWPSIKSDKXKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQ 388
           PW  ++ DK + ++  D+   + EE+ V   D  +V+ G+H++++ +
Sbjct: 134 PWDVMEDDK-EVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGE 179


>05_03_0545 - 15244647-15245147,15245342-15245635
          Length = 264

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -1

Query: 371 RVCLQPRCSRPPF*QRFLPGRNAGR 297
           R CLQPR SRPP  ++F  GR+  R
Sbjct: 221 RDCLQPRQSRPPHYRQFTRGRHPNR 245


>03_02_0485 - 8808139-8808618
          Length = 159

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
 Frame = +2

Query: 296 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 451
           DV     EE+ V+  DG I+ + G+     EEK D+   + R   +F RR+ LPE    E
Sbjct: 68  DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127

Query: 452 SVES 463
            +++
Sbjct: 128 QIKA 131


>03_02_0484 + 8805053-8805538
          Length = 161

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
 Frame = +2

Query: 296 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 451
           DV     EE+ V+  DG ++ + G+     EEK D+   + R   +F RR+ LPE    E
Sbjct: 70  DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129

Query: 452 SVES 463
            +++
Sbjct: 130 QIKA 133


>03_02_0483 - 8804021-8804485
          Length = 154

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
 Frame = +2

Query: 296 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 451
           DV     EE+ V+  DG ++ + G+     EEK D+   + R   +F RR+ LPE    E
Sbjct: 63  DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122

Query: 452 SVES 463
            +++
Sbjct: 123 QIKA 126


>01_01_0229 - 1943473-1943922
          Length = 149

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
 Frame = +2

Query: 296 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 451
           D+     EE+ V+  +G + V+ G+     E+K D+   + R   QF RR+ LPE    +
Sbjct: 58  DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117

Query: 452 SVES 463
            V++
Sbjct: 118 QVKA 121


>07_01_1127 + 10456895-10457388,10457488-10458112
          Length = 372

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 371 RVCLQPRCSRPPF*QRFLPGRNAGR 297
           R CLQPR SRPP  ++F   R+  R
Sbjct: 329 RDCLQPRQSRPPHYRQFTRSRHPNR 353


>09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786
          Length = 489

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3

Query: 318 KKSLLKRRTATSWLKANTRRRKISMVTYRVNS 413
           KKS     T TS  K  TRRRK+++V Y   S
Sbjct: 16  KKSAAGELTTTSEKKKKTRRRKVAVVYYLCRS 47


>09_03_0036 + 11772940-11773171,11774995-11775104
          Length = 113

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 316 GRNLC*NGGRLHRG*RQTRGEERSAWLH 399
           G+NL    G+ H G R+ RG+ER   LH
Sbjct: 21  GQNLMDRRGKRHEGRRERRGKERGRNLH 48


>04_01_0252 - 3329712-3331061
          Length = 449

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 371 RVCLQPRCSRPPF*QRFLPGRNAGR 297
           R CLQPR +RPP  ++F   R++ R
Sbjct: 406 RDCLQPRQNRPPHYRQFTRSRHSNR 430


>03_01_0491 + 3720842-3720958,3721904-3723109
          Length = 440

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 201 AHKGAGCSTEKIFRSQPQAEMLIHEATRTLNFV 103
           A  G GC   K+F S+ +A+   H A  +L F+
Sbjct: 391 ADHGRGCKLAKVFESKDEAKASTHTAISSLPFM 423


>06_03_0390 - 20280355-20281178,20281392-20281565,20281613-20281847
          Length = 410

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
 Frame = +3

Query: 312 PRKKSLL---KRRTATSWLKANTRRRKISMVTYRVNSLVATLCRRAVRLN---LWSPAVF 473
           P+K++ +   K+     W K ++ R   S   Y V++ +A   +R ++++   LW+PAVF
Sbjct: 25  PKKRTKIAHDKKLNVADWRKCDSDR---SENEYSVSNKIANGLQRRLKIDGNALWNPAVF 81

Query: 474 R 476
           R
Sbjct: 82  R 82


>04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,
            8078108-8078360,8078613-8078768,8078854-8079770,
            8079858-8079927,8082310-8082416,8082722-8082755,
            8083621-8083940,8084031-8084820,8084890-8085046,
            8085647-8086068
          Length = 1255

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -1

Query: 494  ITDNTPSEDSRTPQIQPYSPPAKRSDE*IDAICNHADLSSPRVCLQPRC 348
            IT +T S  S + ++Q     A  SDE +  + +    SSPRV   PRC
Sbjct: 913  ITQDT-SNSSASAELQSTETTASLSDEQLALLLHQQLNSSPRVPRVPRC 960


>09_06_0096 - 20840855-20841994
          Length = 379

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +3

Query: 213 PPV---GHLAAAARDLGPASKVIRXXXXXXXXXXXXPRKKSL 329
           PPV   GHLAAAA  L P S+V+             PR  SL
Sbjct: 322 PPVPHHGHLAAAAAALLPCSRVVSAATSPAAGPPLPPRTVSL 363


>08_01_0527 +
           4580599-4580818,4580933-4581806,4581891-4581955,
           4582055-4582110,4582955-4583058,4583310-4583382,
           4583474-4583654,4584537-4584622
          Length = 552

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
 Frame = -1

Query: 485 NTPSEDSRTPQIQPYSPPAKR-------SDE*IDAICNHADLSSPRVCLQPRCSRPP 336
           +TPS D R    +  SPP +R       S +  +    H DLS PR   Q R   PP
Sbjct: 156 DTPSPDPRDAAGKDLSPPRQRRRRQDTPSPKGSEVAGGHDDLSPPRKSRQQRDPSPP 212


>03_05_0124 +
           21034963-21035181,21035618-21037466,21037485-21038194,
           21038426-21038470,21038557-21038745
          Length = 1003

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 478 HLKTAGLHRFSRTALRQSVATSELTRYVTM 389
           HL+T  L R S TAL  S+   +L RY+++
Sbjct: 569 HLRTLDLSRSSMTALPDSIRGLKLLRYLSI 598


>01_07_0105 - 41104655-41104851,41105818-41107150
          Length = 509

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +2

Query: 269 DKXKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISR 406
           D  K   N++  +   EEI V+  +  I+V  + EE++++   ISR
Sbjct: 360 DAKKETSNIEAINVEQEEIKVEEEEEKIIVSQETEEEEEKSAVISR 405


>01_01_0227 + 1933247-1933699
          Length = 150

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 356 VEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVES 463
           V+GK++E+       S +F RR+ LP G   + V +
Sbjct: 87  VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSA 122


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,699,308
Number of Sequences: 37544
Number of extensions: 344964
Number of successful extensions: 959
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)