Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0947
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 56 1e-08
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 52 3e-07
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 52 3e-07
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 52 3e-07
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 50 9e-07
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 9e-07
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 50 1e-06
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 49 3e-06
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 43 2e-04
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 31 0.47
SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 30 1.4
SB_56389| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.5) 28 4.4
SB_55753| Best HMM Match : CbiQ (HMM E-Value=1.7) 28 4.4
SB_14817| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/68 (39%), Positives = 43/68 (63%)
Frame = +2
Query: 260 IKSDKXKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEG 439
++ DK + LDV+++ PEEIS+K G I ++GKH + + +HGY + +F R Y LP+G
Sbjct: 35 MEGDKVEI-ATLDVKNYRPEEISLKVEHGRIKIDGKH-KSEGEHGYETSEFHRSYNLPDG 92
Query: 440 CTAESVES 463
+V S
Sbjct: 93 VDVSTVSS 100
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +2
Query: 266 SDKXKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 442
+++ K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGV 60
Query: 443 TAESVES 463
A +V++
Sbjct: 61 EASNVKT 67
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 278 KFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESV 457
KF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S+
Sbjct: 98 KFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDSL 156
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +2
Query: 266 SDKXKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 442
+++ K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGV 60
Query: 443 TAESVES 463
A +V++
Sbjct: 61 EASNVKT 67
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 278 KFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESV 457
KF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S+
Sbjct: 98 KFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDSL 156
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +2
Query: 269 DKXKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCT 445
D KFQ+ LDV+ F PEEI+ K +G I V G + ++ G+ S++F R Y LPEG
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVD 60
Query: 446 AESVES 463
S+ +
Sbjct: 61 ESSIST 66
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 224 SPCCRGSRPWPSIKSDKXKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYI- 400
SP P+ K D KF + LDV F PEE+ VK + V + E ++HG+
Sbjct: 82 SPPATTENKAPATKDDT-KFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFT 138
Query: 401 SRQFTRRYALP 433
+RQF R + LP
Sbjct: 139 ARQFNRHFVLP 149
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 50.4 bits (115), Expect = 9e-07
Identities = 23/67 (34%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +2
Query: 266 SDKXKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 442
+++ K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 60
Query: 443 TAESVES 463
A +V++
Sbjct: 61 EASNVKT 67
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +2
Query: 293 LDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVES 463
LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG A +V++
Sbjct: 246 LDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEASNVKT 301
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 278 KFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESV 457
KF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S+
Sbjct: 98 KFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDSL 156
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 278 KFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESV 457
KF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S+
Sbjct: 332 KFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDSL 390
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 50.4 bits (115), Expect = 9e-07
Identities = 23/67 (34%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +2
Query: 266 SDKXKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 442
+++ K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 60
Query: 443 TAESVES 463
A +V++
Sbjct: 61 EASNVKT 67
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 278 KFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESV 457
KF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S+
Sbjct: 98 KFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDSL 156
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +2
Query: 293 LDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVES 463
LDV+ + PEEIS K +G + V+G+H + + G+ ++F R + LPEG E+V S
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGIDPENVTS 67
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 263 KSDKXKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 442
K+ + KF + +DV F PE I V+ ++V HE + + H Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREV 150
Query: 443 TAESV 457
+S+
Sbjct: 151 DMDSL 155
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +2
Query: 266 SDKXKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 442
+++ K ++ LDV+ + PEEIS K +G + V+G+H + G+ ++F R + LPEG
Sbjct: 3 NNENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 61
Query: 443 TAESVES 463
A +V++
Sbjct: 62 EASNVKT 68
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 263 KSDKXKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 442
+S KF + +DV+ F PE I V+ ++V HE + + H Y + F R++ LP
Sbjct: 93 ESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFILPREV 151
Query: 443 TAESV 457
+S+
Sbjct: 152 DMDSL 156
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 269 DKXKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYI-SRQFTRRYALPE 436
D KF + LDV F PEE+ VK + V + E ++HG+ +RQF R + LP+
Sbjct: 24 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPQ 78
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 31.5 bits (68), Expect = 0.47
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 365 KHEEKKDQHGYISRQFTRRYAL 430
KHEE++D+HGY+ + T ++AL
Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93
>SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 329 VKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 436
+++A GY+V G H K + G + + R LP+
Sbjct: 10 IRSARGYVVTSGSHTSKSEVRGIMEETCSNRNPLPQ 45
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 484 THHLKTAGLHRFSRTALRQSVATSELTRYVTMLIFLLLVFAFNHDVAVRRFNRDF-FRGE 308
T H+ RF+ + S + L Y +L+F ++F +N +FNR F F+ E
Sbjct: 293 TDHIIHENYSRFTCYNVLSSYFSVTLCIYYILLVFCAVIFVYNCAWTYTKFNRPFDFKKE 352
Query: 307 ML 302
++
Sbjct: 353 LM 354
>SB_56389| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.5)
Length = 473
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 8/41 (19%)
Frame = +3
Query: 393 VTYRVNSLVATLCR--------RAVRLNLWSPAVFRWCVVC 491
+TYR+NSL+ CR R + L +W P V+ W V+C
Sbjct: 230 ITYRLNSLLGGPCRLIPRSWLSRLLLLPMWVPMVYVW-VMC 269
>SB_55753| Best HMM Match : CbiQ (HMM E-Value=1.7)
Length = 448
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 8/41 (19%)
Frame = +3
Query: 393 VTYRVNSLVATLCR--------RAVRLNLWSPAVFRWCVVC 491
+TYR+NSL+ CR R + L +W P V+ W V+C
Sbjct: 214 ITYRLNSLLGGPCRLIPRSWLSRLLLLPMWVPMVYVW-VMC 253
>SB_14817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 27.5 bits (58), Expect = 7.6
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +3
Query: 18 TSEKSLQNLVSIFT--NLQQQNVVDSVVIXLRN*ASSSPHGSTFRLGADSGRFSQCCSRP 191
T + SL + + T N +Q+ +V RN +S+PHGS L + + +
Sbjct: 399 TKDTSLHKVTTDNTSSNSDKQSEKCNVNGHTRNSRNSTPHGSKMNLHSSQTELNPVYNSS 458
Query: 192 PCEQRILPPVGHLAAAARDLGPA 260
P I P L + +L P+
Sbjct: 459 PTLTEITPSSPELTPISSELAPS 481
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,202,605
Number of Sequences: 59808
Number of extensions: 360736
Number of successful extensions: 967
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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