Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0946
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    29   0.11 
L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     25   3.0  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    23   7.0  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   9.2  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   9.2  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 526 QLIWVSRNISLIMRGSSSTGVFLEAIDVFADVVGTWMLLKSR 401
           Q +W S  + +   GS  TG++L   D+   V+G W +L  R
Sbjct: 304 QNLWPSARVEMF--GSFRTGLYLPTSDIDLVVIGQWTMLPLR 343


>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 118 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHF 252
           M++ V TL      L+V     +EN KA  + + G P     L F
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 45



 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 118 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHF 252
           M++ V TL      L+V     +EN KA  + + G P     L F
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121



 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 118 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHF 252
           M++ V TL      L+V     +EN KA  + + G P     L F
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 197


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +1

Query: 412 ATSKYLQHQQIHQWLRETRLLKKTHA*LERCFC*P 516
           A  ++L+   ++Q   ++R  + T+   E CFC P
Sbjct: 142 ANERFLECGPVYQLACDSRYERDTYNCTEGCFCKP 176


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 388 LGKAWLESLTLRFCAEFTMCRRIITSPSWTP 296
           L ++W+ SL +R       CR   T+PSW P
Sbjct: 108 LEQSWIYSLCMR-------CRVEYTTPSWEP 131


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +3

Query: 384 PSGIASLDFSNIQVPTTSANTSMASRNTPVEEDPRIIREMFLLTQIN 524
           P  ++  D S+   PT S++  +  R TPV+     +++    +Q N
Sbjct: 162 PITVSGSDMSSPGAPTGSSSPQITPRPTPVKSPYEWMKKQSYQSQPN 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,400
Number of Sequences: 2352
Number of extensions: 12554
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)