Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0945
         (419 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54C31 Cluster: Putative extracellular matrix protein; ...    32   5.4  
UniRef50_P89134 Cluster: ORF2a; n=1; Simian hemorrhagic fever vi...    31   7.2  
UniRef50_A0AM60 Cluster: Complete genome; n=1; Listeria welshime...    31   9.5  
UniRef50_Q01I12 Cluster: OSIGBa0140J09.9 protein; n=3; Oryza sat...    31   9.5  

>UniRef50_Q54C31 Cluster: Putative extracellular matrix protein;
           n=2; Dictyostelium discoideum AX4|Rep: Putative
           extracellular matrix protein - Dictyostelium discoideum
           AX4
          Length = 996

 Score = 31.9 bits (69), Expect = 5.4
 Identities = 19/62 (30%), Positives = 23/62 (37%)
 Frame = +1

Query: 97  APSSICLYFTTIMCTPCGPMVCYKYEDCGPPLQCLPRSAFKRNGLQDCQFFQQVRFATCA 276
           +PS  CLY     C  CG   C   + C  PL C P         + C  F    F +C 
Sbjct: 524 SPSGACLYEPIANCVNCGGNQCITTDFC-LPLICGPDGVTCAVEPKKCDDFNPCTFDSCI 582

Query: 277 VP 282
            P
Sbjct: 583 SP 584


>UniRef50_P89134 Cluster: ORF2a; n=1; Simian hemorrhagic fever
           virus|Rep: ORF2a - Simian hemorrhagic fever virus (SHFV)
          Length = 204

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 171 IFVTYHRAAWSTHDCSKIQANGGG 100
           I +TY R + STH+C+ I+A+ GG
Sbjct: 67  IILTYGRLSASTHECTSIRASSGG 90


>UniRef50_A0AM60 Cluster: Complete genome; n=1; Listeria welshimeri
           serovar 6b str. SLCC5334|Rep: Complete genome - Listeria
           welshimeri serovar 6b (strain ATCC 35897 / DSM 20650
           /SLCC5334)
          Length = 277

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +2

Query: 110 FACILLQSCVLHAALWYVTNMKIAVLRSSVCLGQLSSEMAYKTASF 247
           FA I    C+  A  WY+  +  +V+  ++C+G   S + +K A++
Sbjct: 53  FASISWLICLFSAYNWYLFPILASVIIIAICIGYFRSSLYFKNAAY 98


>UniRef50_Q01I12 Cluster: OSIGBa0140J09.9 protein; n=3; Oryza
           sativa|Rep: OSIGBa0140J09.9 protein - Oryza sativa
           (Rice)
          Length = 351

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 25/76 (32%), Positives = 31/76 (40%)
 Frame = +1

Query: 187 PLQCLPRSAFKRNGLQDCQFFQQVRFATCAVPALVLNRVHRPVRRVCDAPRPARHTSHDS 366
           P Q  PR     +G +     +  R A  A P     R+    RR  D PRPAR   H +
Sbjct: 132 PNQRAPRRLIGDHGRKPLTLHEGRREAF-ATPPKSYGRLLGRRRRHRDLPRPARGVDHPA 190

Query: 367 VTLI*CHNGSHLATLR 414
           VTL   H  S    +R
Sbjct: 191 VTLRGLHPSSETGDIR 206


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,934,030
Number of Sequences: 1657284
Number of extensions: 7295261
Number of successful extensions: 14837
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14824
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)