Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0945
         (419 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   4.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   4.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   4.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   7.5  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   7.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   7.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   7.5  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 177 IFIFVTYHRAAW 142
           I IFVT HR AW
Sbjct: 18  ILIFVTSHRPAW 29


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 200 CLGQLSSEMAYKTASFFNRFDSLPV 274
           CL     E+A+    +  RF  LPV
Sbjct: 243 CLAHNGGEIAWTKVIYVKRFFGLPV 267


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 200 CLGQLSSEMAYKTASFFNRFDSLPV 274
           CL     E+A+    +  RF  LPV
Sbjct: 243 CLAHNGGEIAWTKVIYVKRFFGLPV 267


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 200 CLGQLSSEMAYKTASFFNRFDSLPV 274
           CL     E+A+    +  RF  LPV
Sbjct: 243 CLAHNGGEIAWTKVIYVKRFFGLPV 267


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 130 IMCTPCGPMVC 162
           + CT CGP  C
Sbjct: 425 VTCTNCGPNPC 435


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 130 IMCTPCGPMVC 162
           + CT CGP  C
Sbjct: 411 VTCTNCGPNPC 421


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 130 IMCTPCGPMVC 162
           + CT CGP  C
Sbjct: 445 VTCTNCGPNPC 455


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 130 IMCTPCGPMVC 162
           + CT CGP  C
Sbjct: 394 VTCTNCGPNPC 404


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,133
Number of Sequences: 438
Number of extensions: 2385
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)