Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0945
         (419 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g17705.1 68415.m02051 expressed protein                             29   1.7  
At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS) id...    27   6.8  
At4g31240.2 68417.m04435 expressed protein                             26   9.0  
At4g31240.1 68417.m04434 expressed protein                             26   9.0  
At1g05680.1 68414.m00589 UDP-glucoronosyl/UDP-glucosyl transfera...    26   9.0  
At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transfera...    26   9.0  

>At2g17705.1 68415.m02051 expressed protein
          Length = 135

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 124 TTIMCTPCGPMVCYKYEDCGPPL 192
           T I CT C  ++ Y Y+D GPPL
Sbjct: 72  TKIKCTSCNHLIGYIYDD-GPPL 93


>At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS)
           identical to solanesyl diphosphate synthase [Arabidopsis
           thaliana] GI:19911233; contains Pfam profile PF00348:
           Polyprenyl synthetase
          Length = 406

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 166 KYEDCGPPLQCLPRSAFKRNGLQDCQFFQQVR 261
           K +D    LQCLPRS F R+ L+D   +   R
Sbjct: 374 KADDAIKNLQCLPRSGF-RSALEDMVLYNLER 404


>At4g31240.2 68417.m04435 expressed protein
          Length = 392

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 106 SICLYFTTIMCTPC 147
           +ICL+F+ I C PC
Sbjct: 45  TICLFFSAIWCRPC 58


>At4g31240.1 68417.m04434 expressed protein
          Length = 392

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 106 SICLYFTTIMCTPC 147
           +ICL+F+ I C PC
Sbjct: 45  TICLFFSAIWCRPC 58


>At1g05680.1 68414.m00589 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 453

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 322 VCDAPRPARHTSHDSVTLI*CHNG 393
           V D P P   T HDS+T+    NG
Sbjct: 40  VSDKPSPPYKTEHDSITVFPISNG 63


>At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein similar to UDP-glucose:salicylic acid
           glucosyltransferase [Nicotiana tabacum] GI:7385017;
           contains Pfam profiles PF00201: UDP-glucoronosyl and
           UDP-glucosyl transferase, PF01535: PPR repeat
          Length = 1184

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 322 VCDAPRPARHTSHDSVTLI*CHNG 393
           V D P P   T HD++T++   NG
Sbjct: 40  VSDKPSPPYKTEHDTITVVPISNG 63


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,640,644
Number of Sequences: 28952
Number of extensions: 162871
Number of successful extensions: 332
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 645327280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)