Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0943
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19900.1 68415.m02326 malate oxidoreductase, putative similar... 82 2e-16
At5g25880.1 68418.m03071 malate oxidoreductase, putative similar... 81 4e-16
At5g11670.1 68418.m01364 malate oxidoreductase, putative similar... 78 4e-15
At1g79750.1 68414.m09304 malate oxidoreductase, putative similar... 71 6e-13
At4g00570.1 68417.m00080 malate oxidoreductase, putative similar... 66 2e-11
At2g13560.1 68415.m01495 malate oxidoreductase, putative similar... 66 2e-11
At4g37340.1 68417.m05289 cytochrome P450 family protein Similar ... 29 3.1
At3g29796.1 68416.m03790 hypothetical protein 28 5.4
At4g37360.1 68417.m05291 cytochrome P450 family protein cytochro... 27 9.5
At2g05290.1 68415.m00557 expressed protein similar to zinc finge... 27 9.5
>At2g19900.1 68415.m02326 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP:P51615) {Vitis vinifera}
Length = 581
Score = 82.2 bits (194), Expect = 2e-16
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +3
Query: 345 TELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGLVYRRPRGLYITILIKXHI*Y 524
TELQ+RNE+LF+ LL ++E+ +PIVYTPTVG ACQKFG ++RRP+GL+I++ K I
Sbjct: 103 TELQERNERLFYKLLIDNVEELLPIVYTPTVGEACQKFGSIFRRPQGLFISLKDKGKILD 162
Query: 525 FEELGQSMLSAQ*FLQTGERILGL 596
+ + GERILGL
Sbjct: 163 VLKNWPERNIQVIVVTDGERILGL 186
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 164 GIDHIKDPRLNKGLAFTLEE 223
G ++DPR NKGLAFT +E
Sbjct: 42 GYSLLRDPRYNKGLAFTEKE 61
>At5g25880.1 68418.m03071 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP:P12628) {Phaseolus vulgaris}
Length = 588
Score = 81.4 bits (192), Expect = 4e-16
Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Frame = +3
Query: 348 ELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGLVYRRPRGLYITILIKXHI*YF 527
+LQ+RNE+LF+ LL ++E+ +P+VYTPTVG ACQK+G +YRRP+GLYI++ K I
Sbjct: 111 DLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKEKGKI--L 168
Query: 528 EEL-GQSMLSAQ*FLQT-GERILGL 596
E L Q + T GERILGL
Sbjct: 169 EVLKNWPQRGIQVIVVTDGERILGL 193
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 164 GIDHIKDPRLNKGLAFTLEEXKL*VFTDFWPQI 262
G ++DPR NKGLAFT +E T P +
Sbjct: 49 GYTLMRDPRYNKGLAFTDKERDAHYITGLLPPV 81
>At5g11670.1 68418.m01364 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP|P12628) {Phaseolus vulgaris}
Length = 588
Score = 78.2 bits (184), Expect = 4e-15
Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Frame = +3
Query: 348 ELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGLVYRRPRGLYITILIKXHI*YF 527
+LQ+RNE+LF+ LL ++E+ +P+VYTPTVG ACQK+G ++R+P+GLYI++ K I
Sbjct: 111 DLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRKPQGLYISLNEKGKI--L 168
Query: 528 EEL-GQSMLSAQ*FLQT-GERILGL 596
E L Q + T GERILGL
Sbjct: 169 EVLKNWPQRGIQVIVVTDGERILGL 193
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 164 GIDHIKDPRLNKGLAFTLEEXKL*VFTDFWPQI 262
G ++DPR NKGLAFT +E T P +
Sbjct: 49 GYTLMRDPRYNKGLAFTDKERDAHYLTGLLPPV 81
>At1g79750.1 68414.m09304 malate oxidoreductase, putative similar to
malate oxidoreductase (NADP-dependent malic enzyme)
GB:P34105 (Populus balsamifera subsp. trichocarpa)
Length = 646
Score = 70.9 bits (166), Expect = 6e-13
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 348 ELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGLVYRRPRGLYITILIKXHI*YF 527
+LQ+ NE+LF+ LL +E+ +P++YTPTVG ACQK+G ++ RP+GL+I++ K I
Sbjct: 169 DLQETNERLFYKLLIDHVEELLPVIYTPTVGEACQKYGSIFLRPQGLFISLKEKGKIHEV 228
Query: 528 EELGQSMLSAQ*FLQTGERILGL 596
+ GERILGL
Sbjct: 229 LRNWPEKNIQVIVVTDGERILGL 251
>At4g00570.1 68417.m00080 malate oxidoreductase, putative similar to
NAD-dependent malic enzyme 59 kDa isoform, mitochondrial
precursor (EC 1.1.1.39) (NAD-ME) (SP:P37225) {Solanum
tuberosum}
Length = 607
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +3
Query: 351 LQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGLVYRRPRGLYIT 497
L DRNE L++ +L +I+ F PI+YTPTVGL CQ + +YRRPRG+Y +
Sbjct: 112 LHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLYRRPRGMYFS 160
>At2g13560.1 68415.m01495 malate oxidoreductase, putative similar to
NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
precursor (EC 1.1.1.39) (NAD-ME) (SP:P37221) {Solanum
tuberosum}
Length = 623
Score = 65.7 bits (153), Expect = 2e-11
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 351 LQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGLVYRRPRGLYIT 497
L DRNE +++ +L +IE++ PIVYTPTVGL CQ + ++RRPRG+Y +
Sbjct: 119 LHDRNETMYYKVLINNIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFS 167
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 161 RGIDHIKDPRLNKGLAFTLEE 223
+G+D + DP NKG AFT+ E
Sbjct: 45 QGLDILHDPWFNKGTAFTMTE 65
>At4g37340.1 68417.m05289 cytochrome P450 family protein Similar to
Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];
Length = 500
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -2
Query: 213 VKARPLLSRGSFIWSMPLSMFGQIMLPVISCIFLLWSKYLGCKPFIILRL 64
+K RP L S W++P+ +++ P + +FL S+ LG P I LRL
Sbjct: 24 IKRRPNLPP-SPSWALPVIGHLRLLKPPLHRVFLSVSESLGDAPIISLRL 72
>At3g29796.1 68416.m03790 hypothetical protein
Length = 463
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 23 FKSFLTFIFERTKFKRNIINGLQPKYLDQ 109
F +FL I T+F RN + L+ KYL Q
Sbjct: 363 FATFLRGIMTSTQFPRNCLANLRGKYLSQ 391
>At4g37360.1 68417.m05291 cytochrome P450 family protein cytochrome
P450 monooxygenase, Arabidopsis thaliana, PID:d1029478
Length = 499
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 174 WSMPLSMFGQIMLPVISCIFLLWSKYLGCKPFIILRL 64
W++P+ +++ P + +FL S+ LG P I LRL
Sbjct: 36 WALPVIGHLRLLKPPLHRVFLSVSQSLGDAPIISLRL 72
>At2g05290.1 68415.m00557 expressed protein similar to zinc finger
protein [Arabidopsis thaliana] GI:976277
Length = 383
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 74 IINGLQPKYLDQRRNMHEITGNIICPNMLRGIDHIKD-PRL 193
+IN QP + RN++ I G + P+ R I D PR+
Sbjct: 22 LINSDQPNFFSTERNLNSIMGRFLNPDKQRMSKWILDMPRI 62
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,651,681
Number of Sequences: 28952
Number of extensions: 224044
Number of successful extensions: 491
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -