Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0936
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    28   0.072
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.095
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   3.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.3  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 0.072
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -2

Query: 263 QTNQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAY 129
           QT   +L L  N S+ L  +   + WA+ I+N +K++  T  +A+
Sbjct: 67  QTCLDFLLLALNISTILTTVRKQQQWAQLIQN-LKVVATTKTKAW 110


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.095
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 101 YCLVSLVLFHMLFLKCL**FSYHFLYFVP 187
           YC+      H+LFL C   F+ H L++ P
Sbjct: 60  YCVSITFNVHLLFLLCSGYFTVHLLFYCP 88



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 101 YCLVSLVLFHMLFLKCL**FSYHFLYF 181
           YC   +   H+LFL C+  F   F+ F
Sbjct: 150 YCAFIIFTVHLLFLLCIYHFFCAFIIF 176



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 104 CLVSLVLFHMLFLKCL**FSYHFLY 178
           C       H+LFL CL  F+ H L+
Sbjct: 184 CAFIFFNMHLLFLLCLDYFTLHLLF 208


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 448 QAKQAAKRVVQEQKRKECITAANDLTQALVDHLN 347
           QA    +R+++ +KR EC    ND   ALV + N
Sbjct: 178 QADMPLERIIEAEKRVEC----NDPLVALVVNEN 207


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 368 LC*IISSCNALLTFLFLYNTFSCLFCLMFF 457
           LC + +S      FLF+ +TFS      ++
Sbjct: 224 LCQVANSIYGFQNFLFVLSTFSICITQFYY 253


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 556 NHPSQMAKYIFYNGNHDK*HH 618
           NH  Q+ KY+  N +  K H+
Sbjct: 326 NHNEQLRKYLCKNEDETKNHY 346


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 556 NHPSQMAKYIFYNGNHDK*HH 618
           NH  Q+ KY+  N +  K H+
Sbjct: 218 NHNEQLRKYLCKNEDETKNHY 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,648
Number of Sequences: 336
Number of extensions: 2666
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)